EP1L4_ARATH
ID EP1L4_ARATH Reviewed; 443 AA.
AC Q9ZVA5;
DT 07-JUN-2017, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1999, sequence version 1.
DT 25-MAY-2022, entry version 134.
DE RecName: Full=EP1-like glycoprotein 4 {ECO:0000305};
DE AltName: Full=Curculin-like (Mannose-binding) lectin family protein {ECO:0000303|PubMed:23738689};
DE Flags: Precursor;
GN OrderedLocusNames=At1g78860 {ECO:0000312|Araport:AT1G78860};
GN ORFNames=F9K20.9 {ECO:0000312|EMBL:AAC83024.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP SUBCELLULAR LOCATION.
RX PubMed=18796151; DOI=10.1186/1471-2229-8-94;
RA Irshad M., Canut H., Borderies G., Pont-Lezica R., Jamet E.;
RT "A new picture of cell wall protein dynamics in elongating cells of
RT Arabidopsis thaliana: confirmed actors and newcomers.";
RL BMC Plant Biol. 8:94-94(2008).
RN [4]
RP SUBCELLULAR LOCATION.
RX PubMed=23738689; DOI=10.1111/tpj.12257;
RA Shen J., Suen P.K., Wang X., Lin Y., Lo S.W., Rojo E., Jiang L.;
RT "An in vivo expression system for the identification of cargo proteins of
RT vacuolar sorting receptors in Arabidopsis culture cells.";
RL Plant J. 75:1003-1017(2013).
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000269|PubMed:23738689}. Secreted,
CC cell wall {ECO:0000269|PubMed:18796151}.
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DR EMBL; AC005679; AAC83024.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE36163.1; -; Genomic_DNA.
DR PIR; A96818; A96818.
DR RefSeq; NP_178007.1; NM_106534.2.
DR AlphaFoldDB; Q9ZVA5; -.
DR SMR; Q9ZVA5; -.
DR IntAct; Q9ZVA5; 1.
DR STRING; 3702.AT1G78860.1; -.
DR PaxDb; Q9ZVA5; -.
DR PRIDE; Q9ZVA5; -.
DR ProteomicsDB; 222325; -.
DR EnsemblPlants; AT1G78860.1; AT1G78860.1; AT1G78860.
DR GeneID; 844223; -.
DR Gramene; AT1G78860.1; AT1G78860.1; AT1G78860.
DR KEGG; ath:AT1G78860; -.
DR Araport; AT1G78860; -.
DR TAIR; locus:2037568; AT1G78860.
DR eggNOG; ENOG502QWJD; Eukaryota.
DR HOGENOM; CLU_043351_0_0_1; -.
DR InParanoid; Q9ZVA5; -.
DR OMA; ECQWPEK; -.
DR OrthoDB; 556631at2759; -.
DR PhylomeDB; Q9ZVA5; -.
DR PRO; PR:Q9ZVA5; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9ZVA5; baseline and differential.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0005739; C:mitochondrion; HDA:TAIR.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProtKB-KW.
DR CDD; cd00028; B_lectin; 1.
DR Gene3D; 2.90.10.10; -; 1.
DR InterPro; IPR001480; Bulb-type_lectin_dom.
DR InterPro; IPR036426; Bulb-type_lectin_dom_sf.
DR InterPro; IPR003609; Pan_app.
DR InterPro; IPR035446; SLSG/EP1.
DR Pfam; PF01453; B_lectin; 1.
DR PIRSF; PIRSF002686; SLG; 1.
DR SMART; SM00108; B_lectin; 1.
DR SUPFAM; SSF51110; SSF51110; 1.
DR PROSITE; PS50927; BULB_LECTIN; 1.
DR PROSITE; PS50948; PAN; 1.
PE 3: Inferred from homology;
KW Cell wall; Disulfide bond; Glycoprotein; Lectin; Reference proteome;
KW Secreted; Signal; WD repeat.
FT SIGNAL 1..22
FT /evidence="ECO:0000255"
FT CHAIN 23..443
FT /note="EP1-like glycoprotein 4"
FT /evidence="ECO:0000255"
FT /id="PRO_5009974830"
FT DOMAIN 29..159
FT /note="Bulb-type lectin"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00038"
FT REPEAT 254..296
FT /note="WD"
FT /evidence="ECO:0000255"
FT DOMAIN 356..433
FT /note="PAN"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00315"
FT CARBOHYD 66
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 102
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 258
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 269
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT CARBOHYD 434
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
FT DISULFID 387..409
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00315"
FT DISULFID 391..397
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00315"
SQ SEQUENCE 443 AA; 49194 MW; 437C2AE10D9E0ACF CRC64;
MEFSTTLALF FTLSIFLVGA QAKVPVDDQF RVVNEGGYTD YSPIEYNPDV RGFVPFSDNF
RLCFYNTTQN AYTLALRIGN RAQESTLRWV WEANRGSPVK ENATLTFGED GNLVLAEADG
RVVWQTNTAN KGVVGIKILE NGNMVIYDSN GKFVWQSFDS PTDTLLVGQS LKLNGQNKLV
SRLSPSVNAN GPYSLVMEAK KLVLYYTTNK TPKPIGYYEY EFFTKIAQLQ SMTFQAVEDA
DTTWGLHMEG VDSGSQFNVS TFLSRPKHNA TLSFLRLESD GNIRVWSYST LATSTAWDVT
YTAFTNDNTD GNDECRIPEH CLGFGLCKKG QCNACPSDIG LLGWDETCKI PSLASCDPKT
FHYFKIEGAD SFMTKYNGGS TTTESACGDK CTRDCKCLGF FYNRKSSRCW LGYELKTLTK
TGDTSLVAYV KAPNASKKSA LAI
