EPG5_DANRE
ID EPG5_DANRE Reviewed; 2532 AA.
AC A5WUT8;
DT 02-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 10-JUL-2007, sequence version 1.
DT 03-AUG-2022, entry version 72.
DE RecName: Full=Ectopic P granules protein 5 homolog;
GN Name=epg5; ORFNames=si:dkey-165i4.3;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen;
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S.,
RA Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N.,
RA Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J.,
RA Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J.,
RA Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
RA McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
RA Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
RA Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A.,
RA Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P.,
RA Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C.,
RA Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C.,
RA Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M.,
RA Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G.,
RA Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F.,
RA Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M.,
RA Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M.,
RA de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C.,
RA Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
CC -!- FUNCTION: Involved in autophagy. May play a role in a late step of
CC autophagy, such as clearance of autophagosomal cargo (By similarity).
CC {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the EPG5 family. {ECO:0000305}.
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DR EMBL; CR753867; CAN88788.1; -; Genomic_DNA.
DR RefSeq; NP_001103995.1; NM_001110525.1.
DR AlphaFoldDB; A5WUT8; -.
DR SMR; A5WUT8; -.
DR STRING; 7955.ENSDARP00000121482; -.
DR PaxDb; A5WUT8; -.
DR PeptideAtlas; A5WUT8; -.
DR Ensembl; ENSDART00000144525; ENSDARP00000121482; ENSDARG00000059846.
DR GeneID; 569543; -.
DR KEGG; dre:569543; -.
DR CTD; 57724; -.
DR ZFIN; ZDB-GENE-070705-307; epg5.
DR eggNOG; KOG3622; Eukaryota.
DR GeneTree; ENSGT00390000007354; -.
DR InParanoid; A5WUT8; -.
DR OrthoDB; 42984at2759; -.
DR PhylomeDB; A5WUT8; -.
DR TreeFam; TF313847; -.
DR PRO; PR:A5WUT8; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 5.
DR Bgee; ENSDARG00000059846; Expressed in retina and 20 other tissues.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0097352; P:autophagosome maturation; IBA:GO_Central.
DR GO; GO:0061909; P:autophagosome-lysosome fusion; IMP:ZFIN.
DR GO; GO:0060576; P:intestinal epithelial cell development; IMP:ZFIN.
DR GO; GO:0036335; P:intestinal stem cell homeostasis; IMP:ZFIN.
DR InterPro; IPR029651; EPG-5.
DR PANTHER; PTHR31139:SF4; PTHR31139:SF4; 1.
PE 3: Inferred from homology;
KW Autophagy; Coiled coil; Reference proteome.
FT CHAIN 1..2532
FT /note="Ectopic P granules protein 5 homolog"
FT /id="PRO_0000306257"
FT REGION 1..67
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 78..97
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 488..518
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 254..282
FT /evidence="ECO:0000255"
FT COILED 1569..1596
FT /evidence="ECO:0000255"
FT COMPBIAS 53..67
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 78..92
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2532 AA; 286825 MW; B24637F2388AB52E CRC64;
MLHLQVKKER QSESVRQPSG SSKAVNEPEF TDVPLSLPHV PPDLNTAASQ TSLDHHDKAE
NEQQHVLLCE KPEVVQKSTC HEDKEHELPS QDAAPRLDQT SVLAPSSQSD PKPLSAKLEP
FSVPSIYPSI PASLSQPQLS EDSYSISYEL LDGSLMPAAS ERLVAPAVLT LANQESSPPS
LVPVEVVDVE RSRERLYPEL PKTCQSVKPF TSEQLRMWEP GSWLENVELH EAEFQNLAHQ
EGHELYELLL SYWRCRKQLT QAQTELQAAN SDCKNVQNRL WSFKDERLSL QGICADQNKV
YGYHCYQQVT LNEAALAELK HLFSAKAEIL HQTVALHSYT SILSRLQVES YLYRLLSSNP
TTKSVAVQDT SAGNPKSQPS SLQPLKESIS VLFIFTRRVL DDSQFQADIH LWLQRLVSVL
HQVGSTGDHL FILNHLLCCP AGVGKWAVPF LQIKVLDNPS GVYHFMQALA ILMSPARHRP
DFLGHMKPSD ARGNNSLTEP ASGNWTLVDE GGEEDEDPET SWMLLSEDDL VSLFSQFPFD
ELFKHLLGIC SKGDYQPLAT TSQKMMKIFA FASSLVELLA VGLQTYNRAR YRQFVKRIGH
MIRMTLCYVS DHWAQYISLT GVSRTTVQEQ SFSMEKLQVE FDHLFLRAVL HVLKAKRLGI
WLFMSEMPYG TLSSSMLWKI FYIMQCAETD GLEKLSCSLS AEDCIQRLRE SSHQERFQLW
LSEINSSDGI CLLTTFAHMA QPRRTDVDPE FVRNIVLEIY EVSYVSVTTR EIFSKVGREL
LAAIAAAHPH IISVLLERLR ETIERVGMVS LYLFKELPLH LWMPAQEEVG LIRDWLMNFS
LTAVENRLAC IILEGLNWGF QPNGCLILPA PLHSDVALLV IEAYQKYLTD KPYGGILSEG
IKQVSYLANV VRLGQTPESS FNQWAWDIVL RLKLHANERS PQDAWCPLPS SSAPSVPEIT
DSPIMHPVFK AVKAGIPIGC FLAIEMTTIG HSLEKFCSEG ISLLKTLIQS RHLRAAVHIL
ENILPLVYNC QFYLLKNEQF LSCVQLFLQL DSGTQGVTQQ VTQKVAQHLI GPATCENIKL
LNSVIQAHVL ESSRNGRVGA VAVLEFWLQV LTEQSLWYRD RAVLFLLDHM CRSAFLHQQE
ECLQKILYQQ HKSALGYHGD KGLLSSIMGW IVAGNVTPSF IEGSSLTGEV WFAWMILNME
TMFEEDSQLR RCVEHELLSN PACTPDQALK KAQVRLKLQV VPSLQRLMIY RWAQQALATP
ADHPILPLVW QKFFQLYLRQ PGPEFGLEVK GCIGRRYFHS AAHLSLLKSL RQRLVEVSDF
HHAASKALKV PCASGDSGDG LLTPGTPITQ YMTSPDLHTE IVRLFTVFAL WLDDENLQKQ
EIYLPSLPKQ YDTHRLAKIM QRQQEVWMEH VDIERVQHEL QEVLDLWSKV KSEPAVSQNS
SSSIFTDFIN PLAARERILT HLRKHDAPQG SLLPVPMKAP VPDIPTASLT DEKISTTLIQ
EDLTKLQHQA KLATVRETQQ VALDNELLEV LPQLYINRED QLSMQLECRG KSGQPCQGPA
NITVKYSSMH KLEPVQNQIQ SLKSDIKQLQ ADGIKAPPQS LAEAAVHTEN FITALVNVFK
QNPSPGVLKV GITAFYQIVS FVCEDTQRHP PTRQFFTSCI EILGQVFIRD VQSECKHMLK
TILLNRRLCN LLSPYFTPNA SPSELVSLYE EVVNTLHIDS GDVIFMLLTK FDLFQWLSTT
QPPFSERSRL MTVIHQALCT CGLEPEPEVL MPFNIFCKHW TELLLYQFPD HYSDFLRLLM
QSSSDQLLSP DCWRTSLKAL GCSPQTKNKT NKSRSMLLSP QQVDETIEWL SKYFLKLRLS
NGDFRSFGLL SKWGPYIEEV KVFWEDLITY VIDLELNHCG KEPVGSPRLL KALENLHRKM
AKLFEPWILV LDTDNTSHPR CSPWLESDAA VAASLVGLYT RLTETLHEKF KDRLLPGQRG
ALWLHLMFYC ETCTSPKMPE YLLYTYHTEY SRLPWKDLHP DQTLMNQFFN VERGSPKSCF
VFMGELLCEV NWVSVLSDSL SPQLNPSTHT MVVSVLHLMV FLAKEDLSKP ESSVLSLLDQ
SASLPWNLVD FSSYQNVTRY VSTHYPASLV LSHDTSSQQV VRLLRMAAGF EPTTQVLHHK
DMTLKCQAFL HLMVQFLTSL DQNGNISLAS LETEMEKLLE NIVIFNPPET DLQQRHMATC
SLFAEMLTLL NEAGISTAEG LGTKLHCWVE KRARGPLLLP LLTAACRCLA SVRHMTRTTE
ACILSYFTDG CVDQYSGWGP ILVSLQVPEL TVEDFIQESL SLGSFLTLYV YILQRLNLEQ
TLLNEKKTLM LLNTWISQVF PSGPADEAKL FLWWHKFLEL LQIQVDQEDA CSLDTLILTL
MAFQNRLVQL GEERLNSGIL GAIGLGRKSP LSNRFRVVAR SMSAFLLVQV PSENQLRLHP
GTELQLSAKA QQALSALEAM ASNKQYSELH VSVNQACQFI KYPNHCLRDA NTLLTLLVNA
LYTDLHYLDI IR