AGO4_CHICK
ID AGO4_CHICK Reviewed; 794 AA.
AC Q5ZMW0;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=Protein argonaute-4 {ECO:0000255|HAMAP-Rule:MF_03033};
DE Short=Argonaute4 {ECO:0000255|HAMAP-Rule:MF_03033};
DE AltName: Full=Argonaute RISC catalytic component 4;
DE AltName: Full=Eukaryotic translation initiation factor 2C 4 {ECO:0000255|HAMAP-Rule:MF_03033};
DE Short=eIF-2C 4 {ECO:0000255|HAMAP-Rule:MF_03033};
DE Short=eIF2C 4 {ECO:0000255|HAMAP-Rule:MF_03033};
GN Name=AGO4; Synonyms=EIF2C4; ORFNames=RCJMB04_1a17;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=CB; TISSUE=Bursa of Fabricius;
RX PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA Hayashizaki Y., Buerstedde J.-M.;
RT "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT function analysis.";
RL Genome Biol. 6:R6.1-R6.9(2005).
CC -!- FUNCTION: Required for RNA-mediated gene silencing (RNAi). Binds to
CC short RNAs such as microRNAs (miRNAs) and represses the translation of
CC mRNAs which are complementary to them. Lacks endonuclease activity and
CC does not appear to cleave target mRNAs. {ECO:0000255|HAMAP-
CC Rule:MF_03033}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, P-body {ECO:0000255|HAMAP-
CC Rule:MF_03033}.
CC -!- SIMILARITY: Belongs to the argonaute family. Ago subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_03033}.
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DR EMBL; AJ719274; CAG30933.1; -; mRNA.
DR RefSeq; NP_001034365.1; NM_001039276.1.
DR AlphaFoldDB; Q5ZMW0; -.
DR SMR; Q5ZMW0; -.
DR PaxDb; Q5ZMW0; -.
DR Ensembl; ENSGALT00000049753; ENSGALP00000047611; ENSGALG00000039713.
DR GeneID; 419629; -.
DR KEGG; gga:419629; -.
DR CTD; 192670; -.
DR VEuPathDB; HostDB:geneid_419629; -.
DR GeneTree; ENSGT00940000158729; -.
DR InParanoid; Q5ZMW0; -.
DR OMA; VGANRHY; -.
DR OrthoDB; 159407at2759; -.
DR PhylomeDB; Q5ZMW0; -.
DR PRO; PR:Q5ZMW0; -.
DR Proteomes; UP000000539; Chromosome 23.
DR Bgee; ENSGALG00000039713; Expressed in spleen and 12 other tissues.
DR ExpressionAtlas; Q5ZMW0; baseline and differential.
DR GO; GO:0000932; C:P-body; IEA:UniProtKB-SubCell.
DR GO; GO:0016442; C:RISC complex; IEA:UniProtKB-UniRule.
DR GO; GO:0004521; F:endoribonuclease activity; IBA:GO_Central.
DR GO; GO:0035198; F:miRNA binding; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003727; F:single-stranded RNA binding; IBA:GO_Central.
DR GO; GO:0035278; P:miRNA-mediated gene silencing by inhibition of translation; ISS:UniProtKB.
DR GO; GO:0006402; P:mRNA catabolic process; ISS:UniProtKB.
DR CDD; cd04657; Piwi_ago-like; 1.
DR Gene3D; 3.30.420.10; -; 1.
DR HAMAP; MF_03033; AGO4; 1.
DR InterPro; IPR028604; AGO4.
DR InterPro; IPR014811; ArgoL1.
DR InterPro; IPR032472; ArgoL2.
DR InterPro; IPR032473; Argonaute_Mid_dom.
DR InterPro; IPR032474; Argonaute_N.
DR InterPro; IPR003100; PAZ_dom.
DR InterPro; IPR036085; PAZ_dom_sf.
DR InterPro; IPR003165; Piwi.
DR InterPro; IPR045246; Piwi_ago-like.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR Pfam; PF08699; ArgoL1; 1.
DR Pfam; PF16488; ArgoL2; 1.
DR Pfam; PF16487; ArgoMid; 1.
DR Pfam; PF16486; ArgoN; 1.
DR Pfam; PF02170; PAZ; 1.
DR Pfam; PF02171; Piwi; 1.
DR SMART; SM01163; DUF1785; 1.
DR SMART; SM00949; PAZ; 1.
DR SMART; SM00950; Piwi; 1.
DR SUPFAM; SSF101690; SSF101690; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
DR PROSITE; PS50821; PAZ; 1.
DR PROSITE; PS50822; PIWI; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Reference proteome; Ribonucleoprotein; RNA-binding;
KW RNA-mediated gene silencing; Translation regulation.
FT CHAIN 1..794
FT /note="Protein argonaute-4"
FT /id="PRO_0000371225"
FT DOMAIN 158..271
FT /note="PAZ"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_03033"
FT DOMAIN 442..753
FT /note="Piwi"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_03033"
FT REGION 758..779
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 794 AA; 89531 MW; C97D19B3C096F554 CRC64;
MVRHFKMQIF GDRQPGYDGK RNMYTAHPLP IGRDRVDMEV TLPGEGKDQT FKVSIQWVSV
VSLQLLLEAL AGHLNEVPED SVQALDVITR HLPSMRYTPV GRSFFSPPEG YYHPLGGGRE
VWFGFHQSVR PAMWNMMLNI DVSATAFYRA QPIIEFMCEV LDIQNINEQT KPLTDSQRVK
FTKEIRGLKV EVTHCGQMKR KYRVCNVTRR PASHQTFPLQ LENGQAMECT VAQYFKQKYS
LQLKYPHLPC LQVGQEQKHT YLPLEVCNIV AGQRCIKKLT DNQTSTMIKA TARSAPDRQE
EISRLVKSNS MVGGPDPYLK EFGIVVHNEM TELTGRVLPA PMLQYGGRNK TVATPNQGVW
DMRGKQFYAG IEIKVWAVAC FAPQKQCRED LLKSFTDQLR KISKDAGMPI QGQPCFCKYA
QGADSVEPMF KHLKLTYVGL QLIVVILPGK TPVYAEVKRV GDTLLGMATQ CVQVKNVVKT
SPQTLSNLCL KINAKLGGIN NVLVPHQRPS VFQQPVIFLG ADVTHPPAGD GKKPSIAAVV
GSMDGHPSRY CATVRVQTSR QETSQELLYS QEVIQDLTNM VRELLIQFYK STRFKPTRII
YYRGGVSEGQ MKQVAWPELI AIRKACISLE EDYRPGITYI VVQKRHHTRL FCADKTERVG
KSGNVPAGTT VDSTITHPSE FDFYLCSHAG IQGTSRPSHY QVLWDDNCFT ADELQLLTYQ
LCHTYVRCTR SVSIPAPAYY ARLVAFRARY HLVDKDHDSA EGSHVSGQSN GRDPQALAKA
VQIHHDTQHT MYFA