ID   AGP1_ORYSJ              Reviewed;         146 AA.
AC   Q6Z232; A0A0P0XGV7;
DT   05-OCT-2010, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2004, sequence version 1.
DT   25-MAY-2022, entry version 67.
DE   RecName: Full=Arabinogalactan protein 1;
DE            Short=OsAGP1;
DE   Flags: Precursor;
GN   Name=AGP1; OrderedLocusNames=Os08g0482300;
GN   ORFNames=OJ1111_H02.8, OSJNBb0092C08.37;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA], PROTEIN SEQUENCE OF 43-63, TISSUE
RP   SPECIFICITY, AND GLYCOSYLATION.
RC   STRAIN=cv. Koshihikari; TISSUE=Aleurone;
RX   PubMed=15653800; DOI=10.1093/pcp/pch208;
RA   Mashiguchi K., Yamaguchi I., Suzuki Y.;
RT   "Isolation and identification of glycosylphosphatidylinositol-anchored
RT   arabinogalactan proteins and novel beta-glucosyl Yariv-reactive proteins
RT   from seeds of rice (Oryza sativa).";
RL   Plant Cell Physiol. 45:1817-1829(2004).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
CC   -!- FUNCTION: Proteoglycan that seems to be implicated in diverse
CC       developmental roles such as differentiation, cell-cell recognition,
CC       embryogenesis and programmed cell death. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Vacuole, aleurone grain membrane {ECO:0000305};
CC       Lipid-anchor, GPI-anchor {ECO:0000305}.
CC   -!- TISSUE SPECIFICITY: Expressed in roots, stems, leaves, flowers and
CC       seeds. {ECO:0000269|PubMed:15653800}.
CC   -!- PTM: O-glycosylated on hydroxyprolines; noncontiguous hydroxylproline
CC       residues are glycosylated with arabinogalactan.
CC       {ECO:0000269|PubMed:15653800}.
CC   -!- SIMILARITY: Belongs to the classical AGP family. {ECO:0000305}.
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DR   EMBL; EU282461; ABX83033.1; -; Genomic_DNA.
DR   EMBL; AP004213; BAD09289.1; -; Genomic_DNA.
DR   EMBL; AP005391; BAD10290.1; -; Genomic_DNA.
DR   EMBL; AP008214; BAF23982.1; -; Genomic_DNA.
DR   EMBL; AP014964; BAT05937.1; -; Genomic_DNA.
DR   EMBL; AK107940; -; NOT_ANNOTATED_CDS; mRNA.
DR   RefSeq; XP_015648955.1; XM_015793469.1.
DR   AlphaFoldDB; Q6Z232; -.
DR   STRING; 4530.OS08T0482300-01; -.
DR   EnsemblPlants; Os08t0482300-01; Os08t0482300-01; Os08g0482300.
DR   GeneID; 4345858; -.
DR   Gramene; Os08t0482300-01; Os08t0482300-01; Os08g0482300.
DR   KEGG; osa:4345858; -.
DR   HOGENOM; CLU_150935_0_0_1; -.
DR   OMA; CQFVIAF; -.
DR   Proteomes; UP000000763; Chromosome 8.
DR   Proteomes; UP000059680; Chromosome 8.
DR   Genevisible; Q6Z232; OS.
DR   GO; GO:0032578; C:aleurone grain membrane; IDA:UniProtKB.
DR   GO; GO:0031225; C:anchored component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005773; C:vacuole; IEA:UniProtKB-KW.
PE   1: Evidence at protein level;
KW   Direct protein sequencing; Glycoprotein; GPI-anchor; Hydroxylation;
KW   Lipoprotein; Membrane; Proteoglycan; Reference proteome; Signal; Vacuole.
FT   SIGNAL          1..42
FT                   /evidence="ECO:0000269|PubMed:15653800"
FT   CHAIN           43..120
FT                   /note="Arabinogalactan protein 1"
FT                   /id="PRO_0000397888"
FT   PROPEP          121..146
FT                   /note="Removed in mature form"
FT                   /evidence="ECO:0000255"
FT                   /id="PRO_0000397889"
FT   REGION          21..128
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        29..78
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        86..104
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   LIPID           120
FT                   /note="GPI-anchor amidated serine"
FT                   /evidence="ECO:0000255"
SQ   SEQUENCE   146 AA;  13703 MW;  5803A27E660AE03A CRC64;
     MARLHLVVVA MAALFAAAAV AQGPSASPTP APKAQPPVAT PPTRPPAVAP VSPPAAQPPV
     TTPPPVSAPA PVPAPSAAAT PSPQASAPTA EPPVLSPPAP APGSISQSPT EAPTSPPPPS
     AASGVSPSAA AVVAAWAAVA AVAAFY