ERF1_CAEEL
ID ERF1_CAEEL Reviewed; 593 AA.
AC O16520; S6EZT6;
DT 14-AUG-2001, integrated into UniProtKB/Swiss-Prot.
DT 05-DEC-2018, sequence version 3.
DT 03-AUG-2022, entry version 146.
DE RecName: Full=Eukaryotic peptide chain release factor subunit 1 {ECO:0000250|UniProtKB:P62495};
DE Short=Eukaryotic release factor 1 {ECO:0000250|UniProtKB:P62495};
DE Short=eRF1 {ECO:0000250|UniProtKB:P62495};
GN Name=erfa-1 {ECO:0000312|WormBase:T05H4.6a};
GN Synonyms=etf-1 {ECO:0000312|WormBase:T05H4.6a};
GN ORFNames=T05H4.6 {ECO:0000312|WormBase:T05H4.6a};
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- FUNCTION: Directs the termination of nascent peptide synthesis
CC (translation) in response to the termination codons UAA, UAG and UGA.
CC {ECO:0000250|UniProtKB:P62495}.
CC -!- SUBUNIT: Heterodimer of two subunits, one of which binds GTP.
CC {ECO:0000250|UniProtKB:P62495}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:P62495}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=a {ECO:0000312|WormBase:T05H4.6a};
CC IsoId=O16520-1; Sequence=Displayed;
CC Name=b {ECO:0000312|WormBase:T05H4.6b};
CC IsoId=O16520-2; Sequence=VSP_059940;
CC -!- SIMILARITY: Belongs to the eukaryotic release factor 1 family.
CC {ECO:0000305}.
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DR EMBL; BX284605; CCD72044.1; -; Genomic_DNA.
DR EMBL; BX284605; CDG24149.1; -; Genomic_DNA.
DR PIR; T31907; T31907.
DR RefSeq; NP_001294675.1; NM_001307746.1. [O16520-2]
DR AlphaFoldDB; O16520; -.
DR SMR; O16520; -.
DR BioGRID; 44074; 13.
DR IntAct; O16520; 1.
DR STRING; 6239.T05H4.6a; -.
DR EPD; O16520; -.
DR PaxDb; O16520; -.
DR PeptideAtlas; O16520; -.
DR EnsemblMetazoa; T05H4.6a.1; T05H4.6a.1; WBGene00020269. [O16520-1]
DR EnsemblMetazoa; T05H4.6b.1; T05H4.6b.1; WBGene00020269. [O16520-2]
DR EnsemblMetazoa; T05H4.6b.2; T05H4.6b.2; WBGene00020269. [O16520-2]
DR GeneID; 179028; -.
DR CTD; 179028; -.
DR WormBase; T05H4.6a; CE52351; WBGene00020269; erfa-1. [O16520-1]
DR WormBase; T05H4.6b; CE13279; WBGene00020269; erfa-1. [O16520-2]
DR eggNOG; KOG0688; Eukaryota.
DR GeneTree; ENSGT00390000009004; -.
DR HOGENOM; CLU_035759_0_0_1; -.
DR InParanoid; O16520; -.
DR PhylomeDB; O16520; -.
DR Reactome; R-CEL-72764; Eukaryotic Translation Termination.
DR Reactome; R-CEL-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
DR Reactome; R-CEL-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
DR PRO; PR:O16520; -.
DR Proteomes; UP000001940; Chromosome V.
DR Bgee; WBGene00020269; Expressed in germ line (C elegans) and 4 other tissues.
DR GO; GO:0005829; C:cytosol; IEA:GOC.
DR GO; GO:0018444; C:translation release factor complex; IBA:GO_Central.
DR GO; GO:1990825; F:sequence-specific mRNA binding; IBA:GO_Central.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IBA:GO_Central.
DR GO; GO:0002184; P:cytoplasmic translational termination; IBA:GO_Central.
DR Gene3D; 3.30.1330.30; -; 1.
DR Gene3D; 3.30.420.60; -; 1.
DR Gene3D; 3.30.960.10; -; 1.
DR InterPro; IPR042226; eFR1_2_sf.
DR InterPro; IPR005140; eRF1_1_Pelota.
DR InterPro; IPR024049; eRF1_1_sf.
DR InterPro; IPR005141; eRF1_2.
DR InterPro; IPR005142; eRF1_3.
DR InterPro; IPR029064; L30e-like.
DR InterPro; IPR004403; Peptide_chain-rel_eRF1/aRF1.
DR PANTHER; PTHR10113; PTHR10113; 1.
DR Pfam; PF03463; eRF1_1; 1.
DR Pfam; PF03464; eRF1_2; 1.
DR Pfam; PF03465; eRF1_3; 1.
DR SMART; SM01194; eRF1_1; 1.
DR SUPFAM; SSF55315; SSF55315; 1.
DR SUPFAM; SSF55481; SSF55481; 1.
DR TIGRFAMs; TIGR03676; aRF1/eRF1; 1.
PE 3: Inferred from homology;
KW Alternative splicing; Cytoplasm; Protein biosynthesis; Reference proteome.
FT CHAIN 1..593
FT /note="Eukaryotic peptide chain release factor subunit 1"
FT /evidence="ECO:0000305"
FT /id="PRO_0000143148"
FT VAR_SEQ 444..593
FT /note="Missing (in isoform b)"
FT /evidence="ECO:0000305"
FT /id="VSP_059940"
SQ SEQUENCE 593 AA; 66117 MW; 0C2532748F31E016 CRC64;
MSAPAAGATA GGDDAADRNV EMWKIKRLIK SLELARGNGT SMISLIIPPK DQVARIQRML
AEEYGTASNI KSRVNRLSVL GAITSVQGRL KLYNKVPPNG LVVYCGTIMT DEGKEKKVNI
DFEPFKAINT SLYLCDNKFH TEALQGLLAD DNKFGFIIMD GNGCLFGTLQ GNTREVLHKF
TVDLPKKHGR GGQSAVRFAR LRNEKRHNYV RKVAENSVEQ FIKNDKVTVA GLILAGSADF
KTELGQSDMF DQRLQAKMIK TVDIAYGGEN GFNQAIELAA DTLASVKFIQ EKKLIGGYFD
EISQDTGKYV FGVKDTLAAL EMGAIETLIC WENLDIVRYK MKNSLGEDIL LNLRPDEEKD
KSHFTDSETG QDMEIIETMP LLEWFANNYK NFGAALEIVT DKSQEGAQFV RGFGGIGGLL
RYRVDLAHVD LEDELDNIDL DDYSRAAVVS HWAPYSFLLL FKLVSSFFFI NLFINYPALS
NYNISLSQSS SSLIAISHTT LYSKFLFHFI EFAPRVPHYC RFVWSVDAFS SAGKASHVCQ
HTEKETFHAR NEDAIGGLFN RTKVEARATH SHSMTSTLSL PSVDVSTRNS NDF