ERF23_ARATH
ID ERF23_ARATH Reviewed; 192 AA.
AC Q1ECI2; Q8LCM8; Q9LNJ6;
DT 12-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT 11-JUL-2006, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=Ethylene-responsive transcription factor ERF023;
GN Name=ERF023; OrderedLocusNames=At1g01250; ORFNames=F6F3.6;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Kim C.J., Chen H., Quinitio C., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=16407444; DOI=10.1104/pp.105.073783;
RA Nakano T., Suzuki K., Fujimura T., Shinshi H.;
RT "Genome-wide analysis of the ERF gene family in Arabidopsis and rice.";
RL Plant Physiol. 140:411-432(2006).
CC -!- FUNCTION: Probably acts as a transcriptional activator. Binds to the
CC GCC-box pathogenesis-related promoter element. May be involved in the
CC regulation of gene expression by stress factors and by components of
CC stress signal transduction pathways (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the AP2/ERF transcription factor family. ERF
CC subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF97326.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC Sequence=AAM63508.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AC023628; AAF97326.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002684; AEE27261.1; -; Genomic_DNA.
DR EMBL; BT025752; ABF83642.1; -; mRNA.
DR EMBL; AY086507; AAM63508.1; ALT_INIT; mRNA.
DR PIR; G86142; G86142.
DR RefSeq; NP_563624.1; NM_100008.4.
DR AlphaFoldDB; Q1ECI2; -.
DR SMR; Q1ECI2; -.
DR BioGRID; 24557; 5.
DR IntAct; Q1ECI2; 3.
DR STRING; 3702.AT1G01250.1; -.
DR PaxDb; Q1ECI2; -.
DR PRIDE; Q1ECI2; -.
DR ProteomicsDB; 220561; -.
DR EnsemblPlants; AT1G01250.1; AT1G01250.1; AT1G01250.
DR GeneID; 839322; -.
DR Gramene; AT1G01250.1; AT1G01250.1; AT1G01250.
DR KEGG; ath:AT1G01250; -.
DR Araport; AT1G01250; -.
DR TAIR; locus:2035257; AT1G01250.
DR eggNOG; ENOG502RZJ5; Eukaryota.
DR HOGENOM; CLU_063331_5_0_1; -.
DR InParanoid; Q1ECI2; -.
DR OMA; FMEPPER; -.
DR OrthoDB; 1278248at2759; -.
DR PhylomeDB; Q1ECI2; -.
DR PRO; PR:Q1ECI2; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q1ECI2; baseline and differential.
DR Genevisible; Q1ECI2; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0009873; P:ethylene-activated signaling pathway; IEA:UniProtKB-KW.
DR CDD; cd00018; AP2; 1.
DR Gene3D; 3.30.730.10; -; 1.
DR InterPro; IPR001471; AP2/ERF_dom.
DR InterPro; IPR036955; AP2/ERF_dom_sf.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR Pfam; PF00847; AP2; 1.
DR PRINTS; PR00367; ETHRSPELEMNT.
DR SMART; SM00380; AP2; 1.
DR SUPFAM; SSF54171; SSF54171; 1.
DR PROSITE; PS51032; AP2_ERF; 1.
PE 2: Evidence at transcript level;
KW Activator; DNA-binding; Ethylene signaling pathway; Nucleus;
KW Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..192
FT /note="Ethylene-responsive transcription factor ERF023"
FT /id="PRO_0000290383"
FT DNA_BIND 44..101
FT /note="AP2/ERF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00366"
FT REGION 1..43
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..23
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 10
FT /note="S -> P (in Ref. 4; AAM63508)"
FT /evidence="ECO:0000305"
FT CONFLICT 160
FT /note="S -> T (in Ref. 4; AAM63508)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 192 AA; 21051 MW; E1B717F19F71B72E CRC64;
MSPQRMKLSS PPVTNNEPTA TASAVKSCGG GGKETSSSTT RHPVYHGVRK RRWGKWVSEI
REPRKKSRIW LGSFPVPEMA AKAYDVAAFC LKGRKAQLNF PEEIEDLPRP STCTPRDIQV
AAAKAANAVK IIKMGDDDVA GIDDGDDFWE GIELPELMMS GGGWSPEPFV AGDDATWLVD
GDLYQYQFMA CL