ERF25_ARATH
ID ERF25_ARATH Reviewed; 232 AA.
AC Q9FJ90;
DT 12-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 124.
DE RecName: Full=Ethylene-responsive transcription factor ERF025;
GN Name=ERF025; OrderedLocusNames=At5g52020; ORFNames=MSG15.10;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9872454; DOI=10.1093/dnares/5.5.297;
RA Nakamura Y., Sato S., Asamizu E., Kaneko T., Kotani H., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VII. Sequence
RT features of the regions of 1,013,767 bp covered by sixteen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:297-308(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=16407444; DOI=10.1104/pp.105.073783;
RA Nakano T., Suzuki K., Fujimura T., Shinshi H.;
RT "Genome-wide analysis of the ERF gene family in Arabidopsis and rice.";
RL Plant Physiol. 140:411-432(2006).
CC -!- FUNCTION: Probably acts as a transcriptional activator. Binds to the
CC GCC-box pathogenesis-related promoter element. May be involved in the
CC regulation of gene expression by stress factors and by components of
CC stress signal transduction pathways (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the AP2/ERF transcription factor family. ERF
CC subfamily. {ECO:0000305}.
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DR EMBL; AB015478; BAB11050.1; -; Genomic_DNA.
DR EMBL; CP002688; AED96159.1; -; Genomic_DNA.
DR EMBL; AK176464; BAD44227.1; -; mRNA.
DR EMBL; AY086443; AAM63446.1; -; mRNA.
DR RefSeq; NP_200015.1; NM_124581.3.
DR AlphaFoldDB; Q9FJ90; -.
DR BioGRID; 20522; 5.
DR IntAct; Q9FJ90; 2.
DR STRING; 3702.AT5G52020.1; -.
DR iPTMnet; Q9FJ90; -.
DR PaxDb; Q9FJ90; -.
DR PRIDE; Q9FJ90; -.
DR ProteomicsDB; 220563; -.
DR EnsemblPlants; AT5G52020.1; AT5G52020.1; AT5G52020.
DR GeneID; 835277; -.
DR Gramene; AT5G52020.1; AT5G52020.1; AT5G52020.
DR KEGG; ath:AT5G52020; -.
DR Araport; AT5G52020; -.
DR TAIR; locus:2173063; AT5G52020.
DR eggNOG; ENOG502RZJ7; Eukaryota.
DR HOGENOM; CLU_063331_1_1_1; -.
DR InParanoid; Q9FJ90; -.
DR OMA; DADNLWS; -.
DR OrthoDB; 1518719at2759; -.
DR PhylomeDB; Q9FJ90; -.
DR PRO; PR:Q9FJ90; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FJ90; baseline and differential.
DR Genevisible; Q9FJ90; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IPI:TAIR.
DR GO; GO:0050832; P:defense response to fungus; IEP:TAIR.
DR GO; GO:0009873; P:ethylene-activated signaling pathway; IEA:UniProtKB-KW.
DR GO; GO:0019760; P:glucosinolate metabolic process; IMP:TAIR.
DR CDD; cd00018; AP2; 1.
DR Gene3D; 3.30.730.10; -; 1.
DR InterPro; IPR001471; AP2/ERF_dom.
DR InterPro; IPR036955; AP2/ERF_dom_sf.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR Pfam; PF00847; AP2; 1.
DR PRINTS; PR00367; ETHRSPELEMNT.
DR SMART; SM00380; AP2; 1.
DR SUPFAM; SSF54171; SSF54171; 1.
DR PROSITE; PS51032; AP2_ERF; 1.
PE 2: Evidence at transcript level;
KW Activator; DNA-binding; Ethylene signaling pathway; Nucleus;
KW Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..232
FT /note="Ethylene-responsive transcription factor ERF025"
FT /id="PRO_0000290385"
FT DNA_BIND 64..120
FT /note="AP2/ERF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00366"
FT REGION 1..63
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 213..232
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..53
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 232 AA; 25106 MW; 0191374E36188871 CRC64;
MSNNNNSPTT VNQETTTSRE VSITLPTDQS PQTSPGSSSS PSPRPSGGSP ARRTATGLSG
KHSIFRGIRL RNGKWVSEIR EPRKTTRIWL GTYPVPEMAA AAYDVAALAL KGPDAVLNFP
GLALTYVAPV SNSAADIRAA ASRAAEMKQP DQGGDEKVLE PVQPGKEEEL EEVSCNSCSL
EFMDEEAMLN MPTLLTEMAE GMLMSPPRMM IHPTMEDDSP ENHEGDNLWS YK
