ERF27_ARATH
ID ERF27_ARATH Reviewed; 192 AA.
AC Q38Q39; A0ME66; Q9LN84;
DT 21-AUG-2007, integrated into UniProtKB/Swiss-Prot.
DT 22-NOV-2005, sequence version 1.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=Ethylene-responsive transcription factor ERF027;
GN Name=ERF027; OrderedLocusNames=At1g12630; ORFNames=T12C24.16;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=16307362; DOI=10.1007/s11103-005-1511-0;
RA Feng J.-X., Liu D., Pan Y., Gong W., Ma L.-G., Luo J.-C., Deng X.-W.,
RA Zhu Y.-X.;
RT "An annotation update via cDNA sequence analysis and comprehensive
RT profiling of developmental, hormonal or environmental responsiveness of the
RT Arabidopsis AP2/EREBP transcription factor gene family.";
RL Plant Mol. Biol. 59:853-868(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 5-192.
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
RN [5]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 5-192.
RA Pan Y., Gong W., Liu D., Fu Q., Mei W.-Q., Song W.-Q., Ma L.-G., Luo J.-C.,
RA Deng X.-W., Zhu Y.-X.;
RT "Molecular cloning, expression, phylogenetic and functional
RT characterization of the Arabidopsis AP2/EREBP transcription factor
RT family.";
RL Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=16407444; DOI=10.1104/pp.105.073783;
RA Nakano T., Suzuki K., Fujimura T., Shinshi H.;
RT "Genome-wide analysis of the ERF gene family in Arabidopsis and rice.";
RL Plant Physiol. 140:411-432(2006).
CC -!- FUNCTION: Probably acts as a transcriptional activator. Binds to the
CC GCC-box pathogenesis-related promoter element. May be involved in the
CC regulation of gene expression by stress factors and by components of
CC stress signal transduction pathways (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the AP2/ERF transcription factor family. ERF
CC subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF88080.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC Sequence=ABK28393.1; Type=Erroneous termination; Note=Extended C-terminus.; Evidence={ECO:0000305};
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DR EMBL; DQ145776; ABB02373.1; -; mRNA.
DR EMBL; AC025417; AAF88080.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002684; AEE28903.1; -; Genomic_DNA.
DR EMBL; DQ446245; ABE65615.1; -; mRNA.
DR EMBL; DQ652834; ABK28393.1; ALT_SEQ; mRNA.
DR EMBL; AY560893; AAT44960.1; -; mRNA.
DR PIR; A86260; A86260.
DR RefSeq; NP_172723.2; NM_101133.3.
DR AlphaFoldDB; Q38Q39; -.
DR BioGRID; 23059; 1.
DR IntAct; Q38Q39; 1.
DR STRING; 3702.AT1G12630.1; -.
DR iPTMnet; Q38Q39; -.
DR PaxDb; Q38Q39; -.
DR PRIDE; Q38Q39; -.
DR EnsemblPlants; AT1G12630.1; AT1G12630.1; AT1G12630.
DR GeneID; 837819; -.
DR Gramene; AT1G12630.1; AT1G12630.1; AT1G12630.
DR KEGG; ath:AT1G12630; -.
DR Araport; AT1G12630; -.
DR TAIR; locus:2195062; AT1G12630.
DR eggNOG; ENOG502RZJ7; Eukaryota.
DR HOGENOM; CLU_063331_1_1_1; -.
DR InParanoid; Q38Q39; -.
DR OMA; FNDEDLW; -.
DR OrthoDB; 1518719at2759; -.
DR PhylomeDB; Q38Q39; -.
DR PRO; PR:Q38Q39; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q38Q39; baseline and differential.
DR Genevisible; Q38Q39; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IPI:TAIR.
DR GO; GO:0009873; P:ethylene-activated signaling pathway; IEA:UniProtKB-KW.
DR GO; GO:0019760; P:glucosinolate metabolic process; IMP:TAIR.
DR CDD; cd00018; AP2; 1.
DR Gene3D; 3.30.730.10; -; 1.
DR InterPro; IPR001471; AP2/ERF_dom.
DR InterPro; IPR036955; AP2/ERF_dom_sf.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR Pfam; PF00847; AP2; 1.
DR PRINTS; PR00367; ETHRSPELEMNT.
DR SMART; SM00380; AP2; 1.
DR SUPFAM; SSF54171; SSF54171; 1.
DR PROSITE; PS51032; AP2_ERF; 1.
PE 2: Evidence at transcript level;
KW Activator; DNA-binding; Ethylene signaling pathway; Nucleus;
KW Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..192
FT /note="Ethylene-responsive transcription factor ERF027"
FT /id="PRO_0000297923"
FT DNA_BIND 18..74
FT /note="AP2/ERF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00366"
FT REGION 104..132
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 167..192
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 104..131
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 192 AA; 20770 MW; 1D1043C39D5649BC CRC64;
MNSSMASAGL GSRRKDPVYR GIRCRSGKWV SEIREPRKTT RIWLGTYPMA EMAAAAYDVA
AMALKGREAV LNFPGSVGSY PVPESTSAAD IRAAAAAAAA MKGCEEGEEE KKAKEKKSSS
SKSRARECHV DNDVGSSSWC GTEFMDEEEV LNMPNLLANM AEGMMVAPPS WMGSRPSDDS
PENSNDEDLW GY
