ERF80_ARATH
ID ERF80_ARATH Reviewed; 200 AA.
AC Q9FE67;
DT 04-JAN-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 139.
DE RecName: Full=Ethylene-responsive transcription factor 9;
DE Short=AtERF9;
DE AltName: Full=Ethylene-responsive element-binding factor 9;
DE Short=EREBP-9;
GN Name=ERF9; Synonyms=ERF-9, ERF080; OrderedLocusNames=At5g44210;
GN ORFNames=MLN1.14;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND FUNCTION.
RX PubMed=11487705; DOI=10.2307/3871331;
RA Ohta M., Matsui K., Hiratsu K., Shinshi H., Ohme-Takagi M.;
RT "Repression domains of class II ERF transcriptional repressors share an
RT essential motif for active repression.";
RL Plant Cell 13:1959-1968(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Pan Y., Gong W., Liu D., Fu Q., Mei W.-Q., Song W.-Q., Ma L.-G., Luo J.-C.,
RA Deng X.-W., Zhu Y.-X.;
RT "Molecular cloning, expression, phylogenetic and functional
RT characterization of the Arabidopsis AP2/EREBP transcription factor
RT family.";
RL Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9330910; DOI=10.1093/dnares/4.3.215;
RA Sato S., Kotani H., Nakamura Y., Kaneko T., Asamizu E., Fukami M.,
RA Miyajima N., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence
RT features of the 1.6 Mb regions covered by twenty physically assigned P1
RT clones.";
RL DNA Res. 4:215-230(1997).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Cheuk R.F., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=16407444; DOI=10.1104/pp.105.073783;
RA Nakano T., Suzuki K., Fujimura T., Shinshi H.;
RT "Genome-wide analysis of the ERF gene family in Arabidopsis and rice.";
RL Plant Physiol. 140:411-432(2006).
CC -!- FUNCTION: Involved in the regulation of gene expression by stress
CC factors and by components of stress signal transduction pathways.
CC Transcription factor that binds to the GCC-box pathogenesis-related
CC promoter element. Acts as a transcriptional inhibitor and may regulate
CC other AtERFs (By similarity). {ECO:0000250,
CC ECO:0000269|PubMed:11487705}.
CC -!- INTERACTION:
CC Q9FE67; Q9FIW5: ANAC094; NbExp=3; IntAct=EBI-4431933, EBI-25522986;
CC Q9FE67; Q9SKT1: ERF053; NbExp=3; IntAct=EBI-4431933, EBI-25511859;
CC Q9FE67; Q9S7W5: TCP13; NbExp=3; IntAct=EBI-4431933, EBI-4424877;
CC Q9FE67; Q9C9L2: TCP15; NbExp=3; IntAct=EBI-4431933, EBI-4426144;
CC Q9FE67; Q9M1U4: TCP16; NbExp=3; IntAct=EBI-4431933, EBI-15198627;
CC Q9FE67; Q9MAH8: TCP3; NbExp=3; IntAct=EBI-4431933, EBI-25522447;
CC Q9FE67; Q9LVG2: TOE2; NbExp=3; IntAct=EBI-4431933, EBI-4424568;
CC Q9FE67; O64722: ZHD3; NbExp=3; IntAct=EBI-4431933, EBI-1806244;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- DOMAIN: Contains a slightly degenerated ERF-associated amphiphilic
CC repression (EAR) motif, which may be involved in the activity of
CC transcriptional repression. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the AP2/ERF transcription factor family. ERF
CC subfamily. {ECO:0000305}.
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DR EMBL; AB047648; BAB18560.1; -; Genomic_DNA.
DR EMBL; AY560856; AAT44923.1; -; mRNA.
DR EMBL; AB005239; BAB10988.1; -; Genomic_DNA.
DR EMBL; CP002688; AED95075.1; -; Genomic_DNA.
DR EMBL; BT015876; AAU95412.1; -; mRNA.
DR EMBL; BT020188; AAV43790.1; -; mRNA.
DR RefSeq; NP_199234.1; NM_123788.5.
DR AlphaFoldDB; Q9FE67; -.
DR SMR; Q9FE67; -.
DR BioGRID; 19694; 13.
DR IntAct; Q9FE67; 9.
DR STRING; 3702.AT5G44210.1; -.
DR PaxDb; Q9FE67; -.
DR PRIDE; Q9FE67; -.
DR ProteomicsDB; 221869; -.
DR EnsemblPlants; AT5G44210.1; AT5G44210.1; AT5G44210.
DR GeneID; 834444; -.
DR Gramene; AT5G44210.1; AT5G44210.1; AT5G44210.
DR KEGG; ath:AT5G44210; -.
DR Araport; AT5G44210; -.
DR TAIR; locus:2167659; AT5G44210.
DR eggNOG; ENOG502RZGB; Eukaryota.
DR HOGENOM; CLU_042594_5_1_1; -.
DR InParanoid; Q9FE67; -.
DR OMA; FACHRER; -.
DR OrthoDB; 1336820at2759; -.
DR PhylomeDB; Q9FE67; -.
DR PRO; PR:Q9FE67; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FE67; baseline and differential.
DR Genevisible; Q9FE67; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IPI:TAIR.
DR GO; GO:0006952; P:defense response; IEA:UniProtKB-KW.
DR GO; GO:0009873; P:ethylene-activated signaling pathway; TAS:TAIR.
DR GO; GO:0019760; P:glucosinolate metabolic process; IMP:TAIR.
DR CDD; cd00018; AP2; 1.
DR Gene3D; 3.30.730.10; -; 1.
DR InterPro; IPR001471; AP2/ERF_dom.
DR InterPro; IPR036955; AP2/ERF_dom_sf.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR Pfam; PF00847; AP2; 1.
DR PRINTS; PR00367; ETHRSPELEMNT.
DR SMART; SM00380; AP2; 1.
DR SUPFAM; SSF54171; SSF54171; 1.
DR PROSITE; PS51032; AP2_ERF; 1.
PE 1: Evidence at protein level;
KW DNA-binding; Ethylene signaling pathway; Nucleus; Plant defense;
KW Reference proteome; Repressor; Transcription; Transcription regulation.
FT CHAIN 1..200
FT /note="Ethylene-responsive transcription factor 9"
FT /id="PRO_0000112559"
FT DNA_BIND 32..89
FT /note="AP2/ERF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00366"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 84..104
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 189..195
FT /note="EAR-like (transcriptional repression)"
FT COMPBIAS 88..104
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 200 AA; 22267 MW; 8EB1149592693445 CRC64;
MAPRQANGRS IAVSEGGGGK TMTMTTMRKE VHFRGVRKRP WGRYAAEIRD PGKKTRVWLG
TFDTAEEAAR AYDTAAREFR GSKAKTNFPL PGESTTVNDG GENDSYVNRT TVTTAREMTR
QRFPFACHRE RKVVGGYASA GFFFDPSRAA SLRAELSRVC PVRFDPVNIE LSIGIRETVK
VEPRRELNLD LNLAPPVVDV
