ID   ERF88_ARATH             Reviewed;         219 AA.
AC   Q3E703; C0SUV1;
DT   12-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT   08-NOV-2005, sequence version 1.
DT   03-AUG-2022, entry version 97.
DE   RecName: Full=Ethylene-responsive transcription factor ERF088;
GN   Name=ERF088; OrderedLocusNames=At1g12890; ORFNames=F13K23.25;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130712; DOI=10.1038/35048500;
RA   Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA   Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA   Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA   Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA   Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA   Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA   Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA   Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA   Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA   Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA   Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA   Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA   Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA   Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA   Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT   "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL   Nature 408:816-820(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA   Fujita M., Mizukado S., Seki M., Shinozaki K., Mitsuda N., Takiguchi Y.,
RA   Takagi M.;
RT   "ORF cloning and analysis of Arabidopsis transcription factor genes.";
RL   Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=16407444; DOI=10.1104/pp.105.073783;
RA   Nakano T., Suzuki K., Fujimura T., Shinshi H.;
RT   "Genome-wide analysis of the ERF gene family in Arabidopsis and rice.";
RL   Plant Physiol. 140:411-432(2006).
CC   -!- FUNCTION: Probably acts as a transcriptional activator. Binds to the
CC       GCC-box pathogenesis-related promoter element. May be involved in the
CC       regulation of gene expression by stress factors and by components of
CC       stress signal transduction pathways (By similarity). {ECO:0000250}.
CC   -!- INTERACTION:
CC       Q3E703; Q9FX36: MYB54; NbExp=3; IntAct=EBI-15200258, EBI-25511270;
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the AP2/ERF transcription factor family. ERF
CC       subfamily. {ECO:0000305}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AC012187; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CP002684; AEE28943.1; -; Genomic_DNA.
DR   EMBL; AB493454; BAH30292.1; -; mRNA.
DR   RefSeq; NP_172749.1; NM_101160.2.
DR   AlphaFoldDB; Q3E703; -.
DR   SMR; Q3E703; -.
DR   BioGRID; 23087; 9.
DR   IntAct; Q3E703; 9.
DR   STRING; 3702.AT1G12890.1; -.
DR   PaxDb; Q3E703; -.
DR   PRIDE; Q3E703; -.
DR   ProteomicsDB; 220632; -.
DR   EnsemblPlants; AT1G12890.1; AT1G12890.1; AT1G12890.
DR   GeneID; 837847; -.
DR   Gramene; AT1G12890.1; AT1G12890.1; AT1G12890.
DR   KEGG; ath:AT1G12890; -.
DR   Araport; AT1G12890; -.
DR   TAIR; locus:2010346; AT1G12890.
DR   eggNOG; ENOG502RYDI; Eukaryota.
DR   HOGENOM; CLU_1221203_0_0_1; -.
DR   InParanoid; Q3E703; -.
DR   OMA; FFYTENT; -.
DR   OrthoDB; 1363702at2759; -.
DR   PRO; PR:Q3E703; -.
DR   Proteomes; UP000006548; Chromosome 1.
DR   ExpressionAtlas; Q3E703; baseline and differential.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR   GO; GO:0009873; P:ethylene-activated signaling pathway; IEA:UniProtKB-KW.
DR   CDD; cd00018; AP2; 1.
DR   Gene3D; 3.30.730.10; -; 1.
DR   InterPro; IPR001471; AP2/ERF_dom.
DR   InterPro; IPR036955; AP2/ERF_dom_sf.
DR   InterPro; IPR016177; DNA-bd_dom_sf.
DR   Pfam; PF00847; AP2; 1.
DR   PRINTS; PR00367; ETHRSPELEMNT.
DR   SMART; SM00380; AP2; 1.
DR   SUPFAM; SSF54171; SSF54171; 1.
DR   PROSITE; PS51032; AP2_ERF; 1.
PE   1: Evidence at protein level;
KW   Activator; DNA-binding; Ethylene signaling pathway; Nucleus;
KW   Reference proteome; Transcription; Transcription regulation.
FT   CHAIN           1..219
FT                   /note="Ethylene-responsive transcription factor ERF088"
FT                   /id="PRO_0000290411"
FT   DNA_BIND        20..77
FT                   /note="AP2/ERF"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00366"
SQ   SEQUENCE   219 AA;  25011 MW;  7E5EE9ACA4DF8477 CRC64;
     MLKSSNKRKS KEEKKLQEGK YLGVRRRPWG RYAAEIRNPF TKERHWLGTF DTAEEAAFAY
     DVAARSISGS LATTNFFYTE NTSLERHPQQ SLEPHMTWGS SSLCLLQDQP FENNHFVADP
     ISSSFSQKQE SSTNLTNTFS HCYNDGDHVG QSKEISLPND MSNSLFGHQD KVGEHDNADH
     MKFGSVLSDE PLCFEYDYIG NYLQSFLKDV NDDAPQFLM