ERF94_ARATH
ID ERF94_ARATH Reviewed; 244 AA.
AC Q9LND1;
DT 12-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 130.
DE RecName: Full=Ethylene-responsive transcription factor ERF094;
DE AltName: Full=Protein OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59;
GN Name=ERF094; Synonyms=ORA59; OrderedLocusNames=At1g06160; ORFNames=F9P14.2;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Cheuk R.F., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RL Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=16407444; DOI=10.1104/pp.105.073783;
RA Nakano T., Suzuki K., Fujimura T., Shinshi H.;
RT "Genome-wide analysis of the ERF gene family in Arabidopsis and rice.";
RL Plant Physiol. 140:411-432(2006).
RN [6]
RP FUNCTION.
RX PubMed=18467450; DOI=10.1104/pp.108.117523;
RA Pre M., Atallah M., Champion A., De Vos M., Pieterse C.M.J., Memelink J.;
RT "The AP2/ERF domain transcription factor ORA59 integrates jasmonic acid and
RT ethylene signals in plant defense.";
RL Plant Physiol. 147:1347-1357(2008).
CC -!- FUNCTION: Probably acts as a transcriptional activator. Binds to the
CC GCC-box pathogenesis-related promoter element. May be involved in the
CC regulation of gene expression by stress factors and by components of
CC stress signal transduction pathways. Acts as an essential integrator of
CC the JA and ethylene signal transduction pathways. Activates the
CC expression of the PDF1.2A gene. {ECO:0000269|PubMed:18467450}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the AP2/ERF transcription factor family. ERF
CC subfamily. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC025290; AAF80213.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE27952.1; -; Genomic_DNA.
DR EMBL; AK228085; BAF00044.1; -; mRNA.
DR EMBL; BT011001; AAR25637.1; -; mRNA.
DR EMBL; BT014958; AAT47809.1; -; mRNA.
DR PIR; B86197; B86197.
DR RefSeq; NP_172106.1; NM_100497.3.
DR AlphaFoldDB; Q9LND1; -.
DR SMR; Q9LND1; -.
DR BioGRID; 22367; 3.
DR STRING; 3702.AT1G06160.1; -.
DR PaxDb; Q9LND1; -.
DR PRIDE; Q9LND1; -.
DR ProteomicsDB; 220635; -.
DR EnsemblPlants; AT1G06160.1; AT1G06160.1; AT1G06160.
DR GeneID; 837125; -.
DR Gramene; AT1G06160.1; AT1G06160.1; AT1G06160.
DR KEGG; ath:AT1G06160; -.
DR Araport; AT1G06160; -.
DR TAIR; locus:2038500; AT1G06160.
DR eggNOG; ENOG502RBAX; Eukaryota.
DR HOGENOM; CLU_058713_1_1_1; -.
DR InParanoid; Q9LND1; -.
DR OMA; SNDFMAF; -.
DR OrthoDB; 1363724at2759; -.
DR PhylomeDB; Q9LND1; -.
DR PRO; PR:Q9LND1; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9LND1; baseline and differential.
DR Genevisible; Q9LND1; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0009873; P:ethylene-activated signaling pathway; TAS:TAIR.
DR GO; GO:0009861; P:jasmonic acid and ethylene-dependent systemic resistance; IMP:TAIR.
DR GO; GO:0009723; P:response to ethylene; IEP:TAIR.
DR GO; GO:0009753; P:response to jasmonic acid; IEP:TAIR.
DR CDD; cd00018; AP2; 1.
DR Gene3D; 3.30.730.10; -; 1.
DR InterPro; IPR001471; AP2/ERF_dom.
DR InterPro; IPR036955; AP2/ERF_dom_sf.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR InterPro; IPR044808; ERF_plant.
DR PANTHER; PTHR31190; PTHR31190; 1.
DR Pfam; PF00847; AP2; 1.
DR PRINTS; PR00367; ETHRSPELEMNT.
DR SMART; SM00380; AP2; 1.
DR SUPFAM; SSF54171; SSF54171; 1.
DR PROSITE; PS51032; AP2_ERF; 1.
PE 2: Evidence at transcript level;
KW Activator; DNA-binding; Ethylene signaling pathway; Nucleus;
KW Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..244
FT /note="Ethylene-responsive transcription factor ERF094"
FT /id="PRO_0000290413"
FT DNA_BIND 81..139
FT /note="AP2/ERF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00366"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 166..219
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 180..219
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 244 AA; 27090 MW; 1077E478A2104AEB CRC64;
MEYQTNFLSG EFSPENSSSS SWSSQESFLW EESFLHQSFD QSFLLSSPTD NYCDDFFAFE
SSIIKEEGKE ATVAAEEEEK SYRGVRKRPW GKFAAEIRDS TRKGIRVWLG TFDTAEAAAL
AYDQAAFALK GSLAVLNFPA DVVEESLRKM ENVNLNDGES PVIALKRKHS MRNRPRGKKK
SSSSSTLTSS PSSSSSYSSS SSSSSLSSRS RKQSVVMTQE SNTTLVVLED LGAEYLEELM
RSCS
