ERF96_ARATH
ID ERF96_ARATH Reviewed; 131 AA.
AC Q9LSX0; A0MFL8; Q6J9R1;
DT 12-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 131.
DE RecName: Full=Ethylene-responsive transcription factor ERF096;
GN Name=ERF096; OrderedLocusNames=At5g43410; ORFNames=MWF20.11;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Pan Y., Gong W., Liu D., Fu Q., Mei W.-Q., Song W.-Q., Ma L.-G., Luo J.-C.,
RA Deng X.-W., Zhu Y.-X.;
RT "Molecular cloning, expression, phylogenetic and functional
RT characterization of the Arabidopsis AP2/EREBP transcription factor
RT family.";
RL Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=16407444; DOI=10.1104/pp.105.073783;
RA Nakano T., Suzuki K., Fujimura T., Shinshi H.;
RT "Genome-wide analysis of the ERF gene family in Arabidopsis and rice.";
RL Plant Physiol. 140:411-432(2006).
CC -!- FUNCTION: Probably acts as a transcriptional activator. Binds to the
CC GCC-box pathogenesis-related promoter element. May be involved in the
CC regulation of gene expression by stress factors and by components of
CC stress signal transduction pathways (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the AP2/ERF transcription factor family. ERF
CC subfamily. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=ABK28740.1; Type=Erroneous termination; Note=Extended C-terminus.; Evidence={ECO:0000305};
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DR EMBL; AY560864; AAT44931.1; -; mRNA.
DR EMBL; AB025638; BAA97420.1; -; Genomic_DNA.
DR EMBL; CP002688; AED94958.1; -; Genomic_DNA.
DR EMBL; DQ447034; ABE66217.1; -; mRNA.
DR EMBL; DQ653344; ABK28740.1; ALT_SEQ; mRNA.
DR RefSeq; NP_199154.1; NM_123707.1.
DR PDB; 5WX9; X-ray; 1.76 A; A=1-131.
DR PDBsum; 5WX9; -.
DR AlphaFoldDB; Q9LSX0; -.
DR SMR; Q9LSX0; -.
DR STRING; 3702.AT5G43410.1; -.
DR PaxDb; Q9LSX0; -.
DR PRIDE; Q9LSX0; -.
DR ProteomicsDB; 220687; -.
DR EnsemblPlants; AT5G43410.1; AT5G43410.1; AT5G43410.
DR GeneID; 834360; -.
DR Gramene; AT5G43410.1; AT5G43410.1; AT5G43410.
DR KEGG; ath:AT5G43410; -.
DR Araport; AT5G43410; -.
DR TAIR; locus:2176511; AT5G43410.
DR eggNOG; ENOG502S124; Eukaryota.
DR HOGENOM; CLU_058713_5_0_1; -.
DR InParanoid; Q9LSX0; -.
DR OMA; FEFEYFD; -.
DR OrthoDB; 1611833at2759; -.
DR PhylomeDB; Q9LSX0; -.
DR PRO; PR:Q9LSX0; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LSX0; baseline and differential.
DR Genevisible; Q9LSX0; AT.
DR GO; GO:0005634; C:nucleus; IDA:TAIR.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IDA:TAIR.
DR GO; GO:0043565; F:sequence-specific DNA binding; IDA:TAIR.
DR GO; GO:0009873; P:ethylene-activated signaling pathway; IEA:UniProtKB-KW.
DR GO; GO:0009789; P:positive regulation of abscisic acid-activated signaling pathway; IMP:TAIR.
DR GO; GO:0010186; P:positive regulation of cellular defense response; IMP:TAIR.
DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:TAIR.
DR GO; GO:0090332; P:stomatal closure; IMP:TAIR.
DR CDD; cd00018; AP2; 1.
DR Gene3D; 3.30.730.10; -; 1.
DR InterPro; IPR001471; AP2/ERF_dom.
DR InterPro; IPR036955; AP2/ERF_dom_sf.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR InterPro; IPR044808; ERF_plant.
DR PANTHER; PTHR31190; PTHR31190; 1.
DR Pfam; PF00847; AP2; 1.
DR PRINTS; PR00367; ETHRSPELEMNT.
DR SMART; SM00380; AP2; 1.
DR SUPFAM; SSF54171; SSF54171; 1.
DR PROSITE; PS51032; AP2_ERF; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Activator; DNA-binding; Ethylene signaling pathway; Nucleus;
KW Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..131
FT /note="Ethylene-responsive transcription factor ERF096"
FT /id="PRO_0000290415"
FT DNA_BIND 14..72
FT /note="AP2/ERF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00366"
FT REGION 80..103
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 81
FT /note="V -> G (in Ref. 1; AAT44931)"
FT /evidence="ECO:0000305"
FT CONFLICT 93
FT /note="A -> S (in Ref. 1; AAT44931)"
FT /evidence="ECO:0000305"
FT HELIX 2..9
FT /evidence="ECO:0007829|PDB:5WX9"
FT STRAND 26..31
FT /evidence="ECO:0007829|PDB:5WX9"
FT TURN 33..36
FT /evidence="ECO:0007829|PDB:5WX9"
FT STRAND 39..46
FT /evidence="ECO:0007829|PDB:5WX9"
FT HELIX 51..63
FT /evidence="ECO:0007829|PDB:5WX9"
FT HELIX 84..91
FT /evidence="ECO:0007829|PDB:5WX9"
FT TURN 97..99
FT /evidence="ECO:0007829|PDB:5WX9"
FT HELIX 100..102
FT /evidence="ECO:0007829|PDB:5WX9"
FT HELIX 105..111
FT /evidence="ECO:0007829|PDB:5WX9"
SQ SEQUENCE 131 AA; 14343 MW; ABD1284C83167F61 CRC64;
MDQGGRGVGA EHGKYRGVRR RPWGKYAAEI RDSRKHGERV WLGTFDTAEE AARAYDQAAY
SMRGQAAILN FPHEYNMGSG VSSSTAMAGS SSASASASSS SRQVFEFEYL DDSVLEELLE
EGEKPNKGKK K
