ERF98_ARATH
ID ERF98_ARATH Reviewed; 139 AA.
AC Q9LTC5;
DT 12-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 126.
DE RecName: Full=Ethylene-responsive transcription factor ERF098;
GN Name=ERF098; OrderedLocusNames=At3g23230; ORFNames=K14B15.14;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia;
RA Gong W., Pan Y., Peng X.Y., Yang J., Zhu Y.X.;
RT "Arabidopsis thaliana putative ethylene responsive element binding protein,
RT similar to the At3g23230 protein encoded by chromosome 3.";
RL Submitted (AUG-2003) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10819329; DOI=10.1093/dnares/7.2.131;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence
RT features of the regions of 4,504,864 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:131-135(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=16407444; DOI=10.1104/pp.105.073783;
RA Nakano T., Suzuki K., Fujimura T., Shinshi H.;
RT "Genome-wide analysis of the ERF gene family in Arabidopsis and rice.";
RL Plant Physiol. 140:411-432(2006).
RN [5]
RP INTERACTION WITH MED25.
RX PubMed=21343311; DOI=10.1093/mp/ssr002;
RA Ou B., Yin K.Q., Liu S.N., Yang Y., Gu T., Wing Hui J.M., Zhang L.,
RA Miao J., Kondou Y., Matsui M., Gu H.Y., Qu L.J.;
RT "A high-throughput screening system for Arabidopsis transcription factors
RT and its application to Med25-dependent transcriptional regulation.";
RL Mol. Plant 4:546-555(2011).
CC -!- FUNCTION: Probably acts as a transcriptional activator. Binds to the
CC GCC-box pathogenesis-related promoter element. May be involved in the
CC regulation of gene expression by stress factors and by components of
CC stress signal transduction pathways (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Interacts with MED25. {ECO:0000269|PubMed:21343311}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the AP2/ERF transcription factor family. ERF
CC subfamily. {ECO:0000305}.
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DR EMBL; AJ580377; CAE45639.1; -; mRNA.
DR EMBL; AB025608; BAA95736.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE76737.1; -; Genomic_DNA.
DR RefSeq; NP_188964.2; NM_113224.3.
DR AlphaFoldDB; Q9LTC5; -.
DR SMR; Q9LTC5; -.
DR BioGRID; 7233; 5.
DR IntAct; Q9LTC5; 3.
DR STRING; 3702.AT3G23230.1; -.
DR PaxDb; Q9LTC5; -.
DR PRIDE; Q9LTC5; -.
DR ProteomicsDB; 220689; -.
DR EnsemblPlants; AT3G23230.1; AT3G23230.1; AT3G23230.
DR GeneID; 821901; -.
DR Gramene; AT3G23230.1; AT3G23230.1; AT3G23230.
DR KEGG; ath:AT3G23230; -.
DR Araport; AT3G23230; -.
DR TAIR; locus:2086213; AT3G23230.
DR eggNOG; ENOG502S1PQ; Eukaryota.
DR HOGENOM; CLU_058713_5_0_1; -.
DR InParanoid; Q9LTC5; -.
DR OMA; PVFEIPC; -.
DR OrthoDB; 1525123at2759; -.
DR PhylomeDB; Q9LTC5; -.
DR PRO; PR:Q9LTC5; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LTC5; baseline and differential.
DR Genevisible; Q9LTC5; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0009873; P:ethylene-activated signaling pathway; TAS:TAIR.
DR CDD; cd00018; AP2; 1.
DR Gene3D; 3.30.730.10; -; 1.
DR InterPro; IPR001471; AP2/ERF_dom.
DR InterPro; IPR036955; AP2/ERF_dom_sf.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR InterPro; IPR044808; ERF_plant.
DR PANTHER; PTHR31190; PTHR31190; 1.
DR Pfam; PF00847; AP2; 1.
DR PRINTS; PR00367; ETHRSPELEMNT.
DR SMART; SM00380; AP2; 1.
DR SUPFAM; SSF54171; SSF54171; 1.
DR PROSITE; PS51032; AP2_ERF; 1.
PE 1: Evidence at protein level;
KW Activator; DNA-binding; Ethylene signaling pathway; Nucleus;
KW Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..139
FT /note="Ethylene-responsive transcription factor ERF098"
FT /id="PRO_0000290416"
FT DNA_BIND 19..77
FT /note="AP2/ERF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00366"
FT REGION 1..25
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 87..112
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..16
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 91..112
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 139 AA; 16097 MW; 5E43AB05E93B4050 CRC64;
MESSNRSSNN QSQDDKQARF RGVRRRPWGK FAAEIRDPSR NGARLWLGTF ETAEEAARAY
DRAAFNLRGH LAILNFPNEY YPRMDDYSLR PPYASSSSSS SSGSTSTNVS RQNQREVFEF
EYLDDKVLEE LLDSEERKR
