ERN3_MEDTR
ID ERN3_MEDTR Reviewed; 238 AA.
AC A9Y0K9;
DT 18-JUL-2018, integrated into UniProtKB/Swiss-Prot.
DT 05-FEB-2008, sequence version 1.
DT 25-MAY-2022, entry version 87.
DE RecName: Full=Ethylene-responsive transcription factor ERN3 {ECO:0000305};
DE Short=ERF transcription factor ERN3 {ECO:0000305};
DE AltName: Full=NF box-binding protein 3 {ECO:0000303|PubMed:17827349};
DE AltName: Full=Protein ERF REQUIRED FOR NODULATION 3 {ECO:0000303|PubMed:17827349};
GN Name=ERN3 {ECO:0000303|PubMed:17827349};
GN Synonyms=NFbB3 {ECO:0000303|PubMed:17827349};
GN OrderedLocusNames=MTR_8g085960 {ECO:0000312|EMBL:AET04210.1};
OS Medicago truncatula (Barrel medic) (Medicago tribuloides).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago.
OX NCBI_TaxID=3880;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, SUBCELLULAR LOCATION, TISSUE
RP SPECIFICITY, AND INDUCTION BY NOD FACTORS.
RX PubMed=17827349; DOI=10.1105/tpc.107.052944;
RA Andriankaja A., Boisson-Dernier A., Frances L., Sauviac L., Jauneau A.,
RA Barker D.G., de Carvalho-Niebel F.;
RT "AP2-ERF transcription factors mediate Nod factor dependent Mt ENOD11
RT activation in root hairs via a novel cis-regulatory motif.";
RL Plant Cell 19:2866-2885(2007).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Jemalong A17;
RX PubMed=22089132; DOI=10.1038/nature10625;
RA Young N.D., Debelle F., Oldroyd G.E.D., Geurts R., Cannon S.B.,
RA Udvardi M.K., Benedito V.A., Mayer K.F.X., Gouzy J., Schoof H.,
RA Van de Peer Y., Proost S., Cook D.R., Meyers B.C., Spannagl M., Cheung F.,
RA De Mita S., Krishnakumar V., Gundlach H., Zhou S., Mudge J., Bharti A.K.,
RA Murray J.D., Naoumkina M.A., Rosen B., Silverstein K.A.T., Tang H.,
RA Rombauts S., Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M.,
RA Bellec A., Berger A., Berges H., Bidwell S., Bisseling T., Choisne N.,
RA Couloux A., Denny R., Deshpande S., Dai X., Doyle J.J., Dudez A.-M.,
RA Farmer A.D., Fouteau S., Franken C., Gibelin C., Gish J., Goldstein S.,
RA Gonzalez A.J., Green P.J., Hallab A., Hartog M., Hua A., Humphray S.J.,
RA Jeong D.-H., Jing Y., Jocker A., Kenton S.M., Kim D.-J., Klee K., Lai H.,
RA Lang C., Lin S., Macmil S.L., Magdelenat G., Matthews L., McCorrison J.,
RA Monaghan E.L., Mun J.-H., Najar F.Z., Nicholson C., Noirot C.,
RA O'Bleness M., Paule C.R., Poulain J., Prion F., Qin B., Qu C., Retzel E.F.,
RA Riddle C., Sallet E., Samain S., Samson N., Sanders I., Saurat O.,
RA Scarpelli C., Schiex T., Segurens B., Severin A.J., Sherrier D.J., Shi R.,
RA Sims S., Singer S.R., Sinharoy S., Sterck L., Viollet A., Wang B.-B.,
RA Wang K., Wang M., Wang X., Warfsmann J., Weissenbach J., White D.D.,
RA White J.D., Wiley G.B., Wincker P., Xing Y., Yang L., Yao Z., Ying F.,
RA Zhai J., Zhou L., Zuber A., Denarie J., Dixon R.A., May G.D.,
RA Schwartz D.C., Rogers J., Quetier F., Town C.D., Roe B.A.;
RT "The Medicago genome provides insight into the evolution of rhizobial
RT symbioses.";
RL Nature 480:520-524(2011).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Jemalong A17;
RX PubMed=24767513; DOI=10.1186/1471-2164-15-312;
RA Tang H., Krishnakumar V., Bidwell S., Rosen B., Chan A., Zhou S.,
RA Gentzbittel L., Childs K.L., Yandell M., Gundlach H., Mayer K.F.,
RA Schwartz D.C., Town C.D.;
RT "An improved genome release (version Mt4.0) for the model legume Medicago
RT truncatula.";
RL BMC Genomics 15:312-312(2014).
CC -!- FUNCTION: Transcription factor involved in symbiotic nodule signaling
CC in response to rhizobial Nod factors (NFs). Binds to the GCC box (NF-
CC responsive box) of ENOD11 promoter. May act as transcriptional
CC repressor of NF-responsive box-containing target gene promoters in root
CC hairs. {ECO:0000269|PubMed:17827349}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00366,
CC ECO:0000269|PubMed:17827349}.
CC -!- TISSUE SPECIFICITY: Expressed in roots, root hairs and leaves.
CC {ECO:0000269|PubMed:17827349}.
CC -!- INDUCTION: Induced by Nod factors in root hairs.
CC {ECO:0000269|PubMed:17827349}.
CC -!- SIMILARITY: Belongs to the AP2/ERF transcription factor family. ERF
CC subfamily. {ECO:0000305}.
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DR EMBL; EU038804; ABW06104.1; -; mRNA.
DR EMBL; CM001224; AET04210.1; -; Genomic_DNA.
DR RefSeq; XP_003629734.1; XM_003629686.2.
DR AlphaFoldDB; A9Y0K9; -.
DR SMR; A9Y0K9; -.
DR STRING; 3880.AET04210; -.
DR EnsemblPlants; AET04210; AET04210; MTR_8g085960.
DR GeneID; 11408318; -.
DR Gramene; AET04210; AET04210; MTR_8g085960.
DR KEGG; mtr:MTR_8g085960; -.
DR eggNOG; ENOG502RB9M; Eukaryota.
DR HOGENOM; CLU_056266_0_0_1; -.
DR OMA; YEYDVNY; -.
DR OrthoDB; 1404076at2759; -.
DR Proteomes; UP000002051; Chromosome 8.
DR GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
DR GO; GO:0045892; P:negative regulation of transcription, DNA-templated; IDA:UniProtKB.
DR GO; GO:0009877; P:nodulation; IMP:UniProtKB.
DR CDD; cd00018; AP2; 1.
DR Gene3D; 3.30.730.10; -; 1.
DR InterPro; IPR001471; AP2/ERF_dom.
DR InterPro; IPR036955; AP2/ERF_dom_sf.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR Pfam; PF00847; AP2; 1.
DR PRINTS; PR00367; ETHRSPELEMNT.
DR SMART; SM00380; AP2; 1.
DR SUPFAM; SSF54171; SSF54171; 1.
DR PROSITE; PS51032; AP2_ERF; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nodulation; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..238
FT /note="Ethylene-responsive transcription factor ERN3"
FT /id="PRO_0000444709"
FT DNA_BIND 24..81
FT /note="AP2/ERF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00366"
SQ SEQUENCE 238 AA; 27199 MW; 5D768C3DDFB5B17D CRC64;
MDYQNQKSNE NKHGEKLMMK NRSKFVGVRQ RASGKWAAEI KDTSKNIRMW LGTYKTAEEA
ARAYDEAAFL LRGTNTRTNF STTHSIPTNS PISLKLKNLL HRKSISNLSQ SKNQCTLMSS
SLQGAPIDNS IMVMENENKS SCSSEESKSL FWVQNQLVSE YNPYGVDMNM MNCSIGITPN
TLQIDYSWPL PQQRINELPT LNDSVNVYGM NECYVEGTYE SKYEYDVNYP LSHLFCFT