ESRP1_XENTR
ID ESRP1_XENTR Reviewed; 687 AA.
AC Q6DEZ7;
DT 23-JAN-2007, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 108.
DE RecName: Full=Epithelial splicing regulatory protein 1;
DE AltName: Full=RNA-binding motif protein 35A;
DE AltName: Full=RNA-binding protein 35A;
GN Name=esrp1; Synonyms=rbm35a;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: mRNA splicing factor that regulates the formation of
CC epithelial cell-specific isoforms. Specifically regulates the
CC expression of FGFR2-IIIb, an epithelial cell-specific isoform of fgfr2.
CC Acts by directly binding specific sequences in mRNAs. Binds the GU-rich
CC sequence motifs in the ISE/ISS-3, a cis-element regulatory region
CC present in the mRNA of fgfr2 (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the ESRP family. {ECO:0000305}.
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DR EMBL; BC076946; AAH76946.1; -; mRNA.
DR RefSeq; NP_001005057.1; NM_001005057.1.
DR AlphaFoldDB; Q6DEZ7; -.
DR SMR; Q6DEZ7; -.
DR STRING; 8364.ENSXETP00000059731; -.
DR PaxDb; Q6DEZ7; -.
DR DNASU; 448608; -.
DR Ensembl; ENSXETT00000032125; ENSXETP00000032125; ENSXETG00000014667.
DR GeneID; 448608; -.
DR KEGG; xtr:448608; -.
DR CTD; 54845; -.
DR Xenbase; XB-GENE-985138; esrp1.
DR eggNOG; KOG1365; Eukaryota.
DR InParanoid; Q6DEZ7; -.
DR OrthoDB; 376996at2759; -.
DR PhylomeDB; Q6DEZ7; -.
DR Proteomes; UP000008143; Chromosome 6.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000014667; Expressed in neurula embryo and 14 other tissues.
DR ExpressionAtlas; Q6DEZ7; differential.
DR GO; GO:0005654; C:nucleoplasm; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:1990904; C:ribonucleoprotein complex; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; ISS:UniProtKB.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd12736; RRM1_ESRP1; 1.
DR Gene3D; 3.30.420.10; -; 1.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR034427; ESRP1_RRM1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000504; RRM_dom.
DR SMART; SM00360; RRM; 3.
DR SUPFAM; SSF53098; SSF53098; 1.
DR SUPFAM; SSF54928; SSF54928; 2.
DR PROSITE; PS50102; RRM; 2.
PE 2: Evidence at transcript level;
KW mRNA processing; mRNA splicing; Nucleus; Reference proteome; Repeat;
KW RNA-binding.
FT CHAIN 1..687
FT /note="Epithelial splicing regulatory protein 1"
FT /id="PRO_0000273049"
FT DOMAIN 226..303
FT /note="RRM 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 327..407
FT /note="RRM 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 446..526
FT /note="RRM 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
SQ SEQUENCE 687 AA; 76311 MW; 2EC289AC1CABDFF2 CRC64;
MTAVSPDYLV VLFTTTAGAN GSKLGSDEKE VIQLLWKVIN LANKKVGELH EVTVRPDHLE
LTEECKEITR IEADSLYVAP QLEQALQQFN QSVGNELNIG VGTSFCICTD GQLHIRQVLH
PEASKKNILL PECFYSFFDL RKEFLKCCPG SSDTNELDVH AMASYLGFEK KSTRYRYGAS
EVDDMGDIIV TLISEPYNYK FSDPERVNYK FESGTCSKLE IIDDNTIIRA RGLPWQSSDQ
DIARFFKGLN IAKGGAALCL NAQGRRNGEA LVRFVSEEHR DLALQRHKHH MGNRYIEVYK
ATGEDFLKIA GGTSNEVAQF LSKENQVIVR MRGLPFTATA EEVLAFFGQQ CPVTGGKEGI
LFVTYPDNRP TGDAFVLFAC EEYAQNALKK HKELLGKRYI ELFRSTAAEV QQVLNRYSSA
PLIPLPTPPI IPVLPQPFIP PVNVRDCIRL RGLPYAATIE DILEFLGEFS ADIRTHGVHM
VLNHQGRPSG DSFIQMKSAD RAYLAAQKCH KKTMKDRYVE VFQCSAEEMN FVLMGGTLNR
NGLSPPPCKL PCLSPPSYTF PAQAAVIPTE AAALYQPSLL LNPRSLQPSA AYYPAGAQLF
MNYTAYYPSP PGSPSSLGFF PASASVSSIP PHNTGAMVRM QGLAYNSGVK EILNFFQGYQ
YSPEDGLLPV NDQARALLTH PKEWVCI