EX7L_ZYMMO
ID EX7L_ZYMMO Reviewed; 544 AA.
AC Q9FDL4; Q5NQT0;
DT 01-JUN-2001, integrated into UniProtKB/Swiss-Prot.
DT 15-FEB-2005, sequence version 2.
DT 25-MAY-2022, entry version 114.
DE RecName: Full=Exodeoxyribonuclease 7 large subunit {ECO:0000255|HAMAP-Rule:MF_00378};
DE EC=3.1.11.6 {ECO:0000255|HAMAP-Rule:MF_00378};
DE AltName: Full=Exodeoxyribonuclease VII large subunit {ECO:0000255|HAMAP-Rule:MF_00378};
DE Short=Exonuclease VII large subunit {ECO:0000255|HAMAP-Rule:MF_00378};
GN Name=xseA {ECO:0000255|HAMAP-Rule:MF_00378}; OrderedLocusNames=ZMO0300;
OS Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC Zymomonadaceae; Zymomonas.
OX NCBI_TaxID=264203;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC 31821 / ZM4 / CP4;
RA Lee H.J., Kang H.S.;
RL Submitted (DEC-1999) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 31821 / ZM4 / CP4;
RX PubMed=15592456; DOI=10.1038/nbt1045;
RA Seo J.-S., Chong H., Park H.S., Yoon K.-O., Jung C., Kim J.J., Hong J.H.,
RA Kim H., Kim J.-H., Kil J.-I., Park C.J., Oh H.-M., Lee J.-S., Jin S.-J.,
RA Um H.-W., Lee H.-J., Oh S.-J., Kim J.Y., Kang H.L., Lee S.Y., Lee K.J.,
RA Kang H.S.;
RT "The genome sequence of the ethanologenic bacterium Zymomonas mobilis
RT ZM4.";
RL Nat. Biotechnol. 23:63-68(2005).
CC -!- FUNCTION: Bidirectionally degrades single-stranded DNA into large acid-
CC insoluble oligonucleotides, which are then degraded further into small
CC acid-soluble oligonucleotides. {ECO:0000255|HAMAP-Rule:MF_00378}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-
CC direction to yield nucleoside 5'-phosphates.; EC=3.1.11.6;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00378};
CC -!- SUBUNIT: Heterooligomer composed of large and small subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00378}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00378}.
CC -!- SIMILARITY: Belongs to the XseA family. {ECO:0000255|HAMAP-
CC Rule:MF_00378}.
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DR EMBL; AF212041; AAG02155.1; -; Genomic_DNA.
DR EMBL; AE008692; AAV88924.1; -; Genomic_DNA.
DR RefSeq; WP_011240235.1; NZ_CP035711.1.
DR AlphaFoldDB; Q9FDL4; -.
DR SMR; Q9FDL4; -.
DR STRING; 264203.ZMO0300; -.
DR EnsemblBacteria; AAV88924; AAV88924; ZMO0300.
DR GeneID; 58026162; -.
DR KEGG; zmo:ZMO0300; -.
DR eggNOG; COG1570; Bacteria.
DR HOGENOM; CLU_023625_3_1_5; -.
DR OMA; WPAVRFE; -.
DR OrthoDB; 1371775at2; -.
DR Proteomes; UP000001173; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0009318; C:exodeoxyribonuclease VII complex; IEA:InterPro.
DR GO; GO:0008855; F:exodeoxyribonuclease VII activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006308; P:DNA catabolic process; IEA:UniProtKB-UniRule.
DR CDD; cd04489; ExoVII_LU_OBF; 1.
DR HAMAP; MF_00378; Exonuc_7_L; 1.
DR InterPro; IPR003753; Exonuc_VII_L.
DR InterPro; IPR020579; Exonuc_VII_lsu_C.
DR InterPro; IPR025824; OB-fold_nuc-bd_dom.
DR PANTHER; PTHR30008; PTHR30008; 1.
DR Pfam; PF02601; Exonuc_VII_L; 2.
DR Pfam; PF13742; tRNA_anti_2; 1.
DR TIGRFAMs; TIGR00237; xseA; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Exonuclease; Hydrolase; Nuclease; Reference proteome.
FT CHAIN 1..544
FT /note="Exodeoxyribonuclease 7 large subunit"
FT /id="PRO_0000197908"
FT REGION 522..544
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 59
FT /note="G -> R (in Ref. 1; AAG02155)"
FT /evidence="ECO:0000305"
FT CONFLICT 448
FT /note="C -> Y (in Ref. 1; AAG02155)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 544 AA; 60593 MW; 3F55ADB77B4F7891 CRC64;
MNSFSFDGSD LLAKSDATDN VRAFSVSEIS GALKRTVEDA FSHIRVRGEI SGFTQAGSGH
CYLALKDDKA VLDSVIWRGV VSRISFRPEN GMEVIATGRL TTYAGRSRYQ LVIEQLEIAG
QGALMALLDR RRRMLAEEGL FNADRKRALP FMPKIIGVVS SPSGAVIRDI LHRLADRCPT
HVILWPVPVQ GDQAAAKVAA AVRGFSALKA GDAIPRPDLL IVARGGGSLE DLWPFNEEIL
VRAVAESSIP VISAVGHETD TTLCDYAADL RAPTPTAAAE LAVPVRSELV NGLNNLHLRM
NNAIARHAKL SEERLEAVRR RLPDGERLLA PFIQLFDDRA SQLERDISER MTHARHKLNF
YAATLRPALL QARIAREQAR LSACRLPTGQ RLVIQEQQKL DNVTRRLKQA YQQRLSHADL
RFKFLAEKLQ PLLLEQRWQQ KAELLAACSL KPELVTARLN IWQKNIDQLW RVAEQAHPDK
ILAKGYARVE DSHSHVVSNA HDAKTHKRLN LIFHDGSVWV APETPPKSRK ADNPPEPPEQ
TSFL