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EXLA3_ORYSJ
ID   EXLA3_ORYSJ             Reviewed;         276 AA.
AC   Q8H274; Q0D6I8;
DT   03-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2003, sequence version 1.
DT   03-AUG-2022, entry version 96.
DE   RecName: Full=Expansin-like A3;
DE   AltName: Full=OsEXLA3;
DE   AltName: Full=OsEXPL3;
DE   AltName: Full=OsaEXPb2.3;
DE   Flags: Precursor;
GN   Name=EXLA3; Synonyms=EXPL3; OrderedLocusNames=Os07g0475400, LOC_Os07g29290;
GN   ORFNames=OsJ_24214 {ECO:0000312|EMBL:EAZ39777.1}, P0571D04.118;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA], DEVELOPMENTAL STAGE, AND INDUCTION.
RX   PubMed=12428004; DOI=10.1104/pp.008888;
RA   Lee Y., Kende H.;
RT   "Expression of alpha-expansin and expansin-like genes in deepwater rice.";
RL   Plant Physiol. 130:1396-1405(2002).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [6]
RP   NOMENCLATURE.
RX   PubMed=15604683; DOI=10.1007/s11103-004-0158-6;
RA   Kende H., Bradford K.J., Brummell D.A., Cho H.-T., Cosgrove D.J.,
RA   Fleming A.J., Gehring C., Lee Y., McQueen-Mason S.J., Rose J.K.C.,
RA   Voesenek L.A.C.;
RT   "Nomenclature for members of the expansin superfamily of genes and
RT   proteins.";
RL   Plant Mol. Biol. 55:311-314(2004).
CC   -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC   -!- DEVELOPMENTAL STAGE: Expressed in the growing regions of roots,
CC       coleoptiles, internodes, and leaves. {ECO:0000269|PubMed:12428004}.
CC   -!- INDUCTION: By gibberellin (GA3). {ECO:0000269|PubMed:12428004}.
CC   -!- SIMILARITY: Belongs to the expansin family. Expansin-like A subfamily.
CC       {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=EXPANSIN homepage;
CC       URL="http://homes.bio.psu.edu/expansins/";
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DR   EMBL; AY100694; AAM52410.1; -; mRNA.
DR   EMBL; AP004315; BAC65927.1; -; Genomic_DNA.
DR   EMBL; AP008213; BAF21535.1; -; Genomic_DNA.
DR   EMBL; AP014963; BAT01445.1; -; Genomic_DNA.
DR   EMBL; CM000144; EAZ39777.1; -; Genomic_DNA.
DR   RefSeq; XP_015645083.1; XM_015789597.1.
DR   AlphaFoldDB; Q8H274; -.
DR   SMR; Q8H274; -.
DR   STRING; 4530.OS07T0475400-01; -.
DR   PaxDb; Q8H274; -.
DR   PRIDE; Q8H274; -.
DR   EnsemblPlants; Os07t0475400-01; Os07t0475400-01; Os07g0475400.
DR   GeneID; 4343213; -.
DR   Gramene; Os07t0475400-01; Os07t0475400-01; Os07g0475400.
DR   KEGG; osa:4343213; -.
DR   eggNOG; ENOG502QSGZ; Eukaryota.
DR   HOGENOM; CLU_027462_3_1_1; -.
DR   InParanoid; Q8H274; -.
DR   OMA; ERCVRQG; -.
DR   OrthoDB; 1097032at2759; -.
DR   Proteomes; UP000000763; Chromosome 7.
DR   Proteomes; UP000007752; Chromosome 7.
DR   Proteomes; UP000059680; Chromosome 7.
DR   Genevisible; Q8H274; OS.
DR   GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR   GO; GO:0048856; P:anatomical structure development; IEA:UniProt.
DR   Gene3D; 2.40.40.10; -; 1.
DR   Gene3D; 2.60.40.760; -; 1.
DR   InterPro; IPR007118; Expan_Lol_pI.
DR   InterPro; IPR007112; Expansin/allergen_DPBB_dom.
DR   InterPro; IPR007117; Expansin_CBD.
DR   InterPro; IPR036749; Expansin_CBD_sf.
DR   InterPro; IPR036908; RlpA-like_sf.
DR   Pfam; PF01357; Expansin_C; 1.
DR   PRINTS; PR01225; EXPANSNFAMLY.
DR   SUPFAM; SSF49590; SSF49590; 1.
DR   SUPFAM; SSF50685; SSF50685; 1.
DR   PROSITE; PS50843; EXPANSIN_CBD; 1.
DR   PROSITE; PS50842; EXPANSIN_EG45; 1.
PE   2: Evidence at transcript level;
KW   Glycoprotein; Reference proteome; Secreted; Signal.
FT   SIGNAL          1..28
FT                   /evidence="ECO:0000255"
FT   CHAIN           29..276
FT                   /note="Expansin-like A3"
FT                   /id="PRO_0000252100"
FT   DOMAIN          52..158
FT                   /note="Expansin-like EG45"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00079"
FT   DOMAIN          172..255
FT                   /note="Expansin-like CBD"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00078"
FT   CARBOHYD        115
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
FT   CARBOHYD        159
FT                   /note="N-linked (GlcNAc...) asparagine"
FT                   /evidence="ECO:0000255"
SQ   SEQUENCE   276 AA;  29726 MW;  DD15BA7F67A129F4 CRC64;
     MAVLLSILSS SFLLLLAASS SSTPRASACE RCVRNGKAAY SPSLSPLPPG GGGGCGYGAM
     AMEMELNGGF LAAGGPRQHR GGLGCGRCFQ MRCRNAEVCS NAGVRVVLTD FHRSNSTDFL
     LGGPAFAGLA KPGMAHKLKK LDALSVEYRR IPCDYKDKNL SILVEEQSKR PNNLVIKFLY
     QGGQTDILAV DVAQVGSSDW RFMTRVYGPV WSIDRAPNGP LQFRAVVTGG YDGKWVWADR
     EVLPANWQPG QVYDTGARIA DVARESCLDC ATLDWK
 
 
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