EXOL4_ARATH
ID EXOL4_ARATH Reviewed; 278 AA.
AC Q9FY71;
DT 01-OCT-2014, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 25-MAY-2022, entry version 108.
DE RecName: Full=Protein EXORDIUM-like 4;
DE Flags: Precursor;
GN Name=EXL4; OrderedLocusNames=At5g09440; ORFNames=T5E8.240;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND G.
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=19216774; DOI=10.1186/1471-2229-9-20;
RA Schroder F., Lisso J., Lange P., Mussig C.;
RT "The extracellular EXO protein mediates cell expansion in Arabidopsis
RT leaves.";
RL BMC Plant Biol. 9:20-20(2009).
CC -!- FUNCTION: May play a role in a brassinosteroid-dependent regulation of
CC growth and development. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Secreted. Secreted, extracellular space.
CC Secreted, extracellular space, apoplast {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the EXORDIUM family. {ECO:0000305}.
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DR EMBL; AL391712; CAC05470.1; -; Genomic_DNA.
DR EMBL; CP002688; AED91393.1; -; Genomic_DNA.
DR EMBL; AY065126; AAL38302.1; -; mRNA.
DR EMBL; AY081560; AAM10122.1; -; mRNA.
DR EMBL; AY087813; AAM65367.1; -; mRNA.
DR RefSeq; NP_196506.1; NM_120981.3.
DR AlphaFoldDB; Q9FY71; -.
DR BioGRID; 16081; 2.
DR STRING; 3702.AT5G09440.1; -.
DR PaxDb; Q9FY71; -.
DR PRIDE; Q9FY71; -.
DR ProteomicsDB; 222302; -.
DR EnsemblPlants; AT5G09440.1; AT5G09440.1; AT5G09440.
DR GeneID; 830803; -.
DR Gramene; AT5G09440.1; AT5G09440.1; AT5G09440.
DR KEGG; ath:AT5G09440; -.
DR Araport; AT5G09440; -.
DR TAIR; locus:2184792; AT5G09440.
DR eggNOG; KOG0017; Eukaryota.
DR HOGENOM; CLU_053777_1_0_1; -.
DR InParanoid; Q9FY71; -.
DR OMA; WRTTESY; -.
DR OrthoDB; 1020782at2759; -.
DR PhylomeDB; Q9FY71; -.
DR PRO; PR:Q9FY71; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FY71; baseline and differential.
DR Genevisible; Q9FY71; AT.
DR GO; GO:0048046; C:apoplast; IEA:UniProtKB-SubCell.
DR GO; GO:0005615; C:extracellular space; IEA:UniProtKB-SubCell.
DR GO; GO:0009506; C:plasmodesma; HDA:TAIR.
DR GO; GO:0002239; P:response to oomycetes; IEP:TAIR.
DR InterPro; IPR006766; EXORDIUM-like.
DR PANTHER; PTHR31279; PTHR31279; 1.
DR Pfam; PF04674; Phi_1; 1.
PE 2: Evidence at transcript level;
KW Apoplast; Glycoprotein; Reference proteome; Secreted; Signal.
FT SIGNAL 1..23
FT /evidence="ECO:0000255"
FT CHAIN 24..278
FT /note="Protein EXORDIUM-like 4"
FT /id="PRO_0000430284"
FT CARBOHYD 35
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 278 AA; 29474 MW; 99E41368AACD050D CRC64;
MAYNYRFAIL LVLLSATVGF TAAALKPPVR TLNGNITLNL IWYGKFTPIQ RSIIVDFIRS
ISSVTAAKGP SVASWWKTTE KYKTGVSTLV VGKQLLLENY PLGKSLKSPY LRALSSKLNA
GGARSITVVL TAKDVTVEGL CMNRCGTHGS KSSSVNSGAY VWVGNSETQC PGYCAWPFHQ
PIYGPQSPPL VAPNGDVGVD GMIINIATLL VNTVTNPSPE AVSACTGIFG SGAYPGYAGR
VLVDKTSGAS YNALGLAGRK YLLPALWDPQ TSTCKTMV
