EXP10_ARATH
ID EXP10_ARATH Reviewed; 249 AA.
AC Q9LDR9;
DT 05-MAR-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 139.
DE RecName: Full=Expansin-A10;
DE Short=AtEXPA10;
DE AltName: Full=Alpha-expansin-10;
DE Short=At-EXP10;
DE Short=AtEx10;
DE AltName: Full=Ath-ExpAlpha-1.1;
DE Flags: Precursor;
GN Name=EXPA10; Synonyms=EXP10; OrderedLocusNames=At1g26770;
GN ORFNames=T24P13.15, T24P13_14;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=10931949; DOI=10.1073/pnas.160276997;
RA Cho H.-T., Cosgrove D.J.;
RT "Altered expression of expansin modulates leaf growth and pedicel
RT abscission in Arabidopsis thaliana.";
RL Proc. Natl. Acad. Sci. U.S.A. 97:9783-9788(2000).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP NOMENCLATURE.
RX PubMed=15604683; DOI=10.1007/s11103-004-0158-6;
RA Kende H., Bradford K.J., Brummell D.A., Cho H.-T., Cosgrove D.J.,
RA Fleming A.J., Gehring C., Lee Y., McQueen-Mason S.J., Rose J.K.C.,
RA Voesenek L.A.C.;
RT "Nomenclature for members of the expansin superfamily of genes and
RT proteins.";
RL Plant Mol. Biol. 55:311-314(2004).
CC -!- FUNCTION: Causes loosening and extension of plant cell walls by
CC disrupting non-covalent bonding between cellulose microfibrils and
CC matrix glucans. No enzymatic activity has been found. Plays a major
CC role in control of leaf growth and influences the mechanical breakage
CC behavior of the pedicel.
CC -!- SUBCELLULAR LOCATION: Secreted, cell wall. Membrane; Peripheral
CC membrane protein.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q9LDR9-1; Sequence=Displayed;
CC -!- TISSUE SPECIFICITY: Most highly expressed in the young leaf petiole and
CC midrib, in trichomes and at the base of the pedicel.
CC -!- DEVELOPMENTAL STAGE: Expression is first seen at the base of the
CC emerging first two true leaves but not of the cotyledons. As leaf
CC development progresses expression begins in the base of the petiole and
CC gradually extends toward the whole midrib and later it is restricted to
CC the vasculature of the petiole and leaf blade and disappears as the
CC leaf matures.
CC -!- SIMILARITY: Belongs to the expansin family. Expansin A subfamily.
CC {ECO:0000305}.
CC -!- WEB RESOURCE: Name=EXPANSIN homepage;
CC URL="http://homes.bio.psu.edu/expansins/";
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DR EMBL; AF229437; AAF61712.1; -; mRNA.
DR EMBL; AF229431; AAF61713.1; -; Genomic_DNA.
DR EMBL; AC006535; AAF87031.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE30731.1; -; Genomic_DNA.
DR EMBL; AY052247; AAK97717.1; -; mRNA.
DR EMBL; AY060512; AAL31125.1; -; mRNA.
DR RefSeq; NP_173999.1; NM_102440.4. [Q9LDR9-1]
DR AlphaFoldDB; Q9LDR9; -.
DR SMR; Q9LDR9; -.
DR STRING; 3702.AT1G26770.2; -.
DR PaxDb; Q9LDR9; -.
DR ProteomicsDB; 222304; -. [Q9LDR9-1]
DR EnsemblPlants; AT1G26770.1; AT1G26770.1; AT1G26770. [Q9LDR9-1]
DR GeneID; 839218; -.
DR Gramene; AT1G26770.1; AT1G26770.1; AT1G26770. [Q9LDR9-1]
DR KEGG; ath:AT1G26770; -.
DR Araport; AT1G26770; -.
DR eggNOG; ENOG502QPUJ; Eukaryota.
DR HOGENOM; CLU_027462_0_1_1; -.
DR InParanoid; Q9LDR9; -.
DR PhylomeDB; Q9LDR9; -.
DR PRO; PR:Q9LDR9; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9LDR9; baseline and differential.
DR Genevisible; Q9LDR9; AT.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0009653; P:anatomical structure morphogenesis; IEA:UniProt.
DR GO; GO:0009664; P:plant-type cell wall organization; IEA:InterPro.
DR Gene3D; 2.40.40.10; -; 1.
DR Gene3D; 2.60.40.760; -; 1.
DR InterPro; IPR007118; Expan_Lol_pI.
DR InterPro; IPR002963; Expansin.
DR InterPro; IPR007112; Expansin/allergen_DPBB_dom.
DR InterPro; IPR007117; Expansin_CBD.
DR InterPro; IPR036749; Expansin_CBD_sf.
DR InterPro; IPR009009; RlpA-like_DPBB.
DR InterPro; IPR036908; RlpA-like_sf.
DR PANTHER; PTHR31867; PTHR31867; 1.
DR Pfam; PF03330; DPBB_1; 1.
DR Pfam; PF01357; Expansin_C; 1.
DR PRINTS; PR01226; EXPANSIN.
DR PRINTS; PR01225; EXPANSNFAMLY.
DR SMART; SM00837; DPBB_1; 1.
DR SUPFAM; SSF49590; SSF49590; 1.
DR SUPFAM; SSF50685; SSF50685; 1.
DR PROSITE; PS50843; EXPANSIN_CBD; 1.
DR PROSITE; PS50842; EXPANSIN_EG45; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Cell wall; Cell wall biogenesis/degradation;
KW Membrane; Reference proteome; Secreted; Signal.
FT SIGNAL 1..21
FT /evidence="ECO:0000255"
FT CHAIN 22..249
FT /note="Expansin-A10"
FT /id="PRO_0000008691"
FT DOMAIN 44..156
FT /note="Expansin-like EG45"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00079"
FT DOMAIN 166..245
FT /note="Expansin-like CBD"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00078"
SQ SEQUENCE 249 AA; 26428 MW; 63D014410D4ABBA1 CRC64;
MGHLGFLVMI MVGVMASSVS GYGGGWINAH ATFYGGGDAS GTMGGACGYG NLYSQGYGTS
TAALSTALFN NGLSCGSCFE IRCENDGKWC LPGSIVVTAT NFCPPNNALA NNNGGWCNPP
LEHFDLAQPV FQRIAQYRAG IVPVSYRRVP CRRRGGIRFT INGHSYFNLV LITNVGGAGD
VHSAAIKGSR TVWQAMSRNW GQNWQSNSYL NGQALSFKVT TSDGRTVVSF NAAPAGWSYG
QTFAGGQFR
