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EXP17_ARATH
ID   EXP17_ARATH             Reviewed;         255 AA.
AC   Q9ZSI1;
DT   05-MAR-2002, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-1999, sequence version 1.
DT   03-AUG-2022, entry version 138.
DE   RecName: Full=Putative expansin-A17;
DE            Short=AtEXPA17;
DE   AltName: Full=Alpha-expansin-17;
DE            Short=At-EXP17;
DE            Short=AtEx17;
DE   AltName: Full=Ath-ExpAlpha-1.13;
DE   Flags: Precursor;
GN   Name=EXPA17; Synonyms=EXP17; OrderedLocusNames=At4g01630;
GN   ORFNames=T15B16.16;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10617198; DOI=10.1038/47134;
RA   Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA   Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA   Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA   de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA   Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA   Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA   Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA   Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA   Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA   Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA   Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA   Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA   Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA   Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA   Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA   Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA   Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA   Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA   Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA   Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA   Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA   Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA   Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA   Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA   Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA   Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA   Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA   de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA   Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA   Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA   Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA   Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA   Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA   Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA   Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA   Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA   Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA   O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA   Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA   Martienssen R., McCombie W.R.;
RT   "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL   Nature 402:769-777(1999).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NOMENCLATURE.
RX   PubMed=15604683; DOI=10.1007/s11103-004-0158-6;
RA   Kende H., Bradford K.J., Brummell D.A., Cho H.-T., Cosgrove D.J.,
RA   Fleming A.J., Gehring C., Lee Y., McQueen-Mason S.J., Rose J.K.C.,
RA   Voesenek L.A.C.;
RT   "Nomenclature for members of the expansin superfamily of genes and
RT   proteins.";
RL   Plant Mol. Biol. 55:311-314(2004).
RN   [4]
RP   FUNCTION, DEVELOPMENTAL STAGE, AND INDUCTION BY AUXIN.
RX   PubMed=23872272; DOI=10.1093/pcp/pct105;
RA   Lee H.W., Kim J.;
RT   "EXPANSINA17 up-regulated by LBD18/ASL20 promotes lateral root formation
RT   during the auxin response.";
RL   Plant Cell Physiol. 54:1600-1611(2013).
CC   -!- FUNCTION: Causes loosening and extension of plant cell walls by
CC       disrupting non-covalent bonding between cellulose microfibrils and
CC       matrix glucans. No enzymatic activity has been found (By similarity).
CC       Target of the transcriptional activator LBD18. Regulated by LBD18 to
CC       promote lateral root formation (PubMed:23872272).
CC       {ECO:0000250|UniProtKB:Q9LDR9, ECO:0000269|PubMed:23872272}.
CC   -!- SUBCELLULAR LOCATION: Secreted, cell wall. Membrane; Peripheral
CC       membrane protein.
CC   -!- DEVELOPMENTAL STAGE: Expressed during lateral root development.
CC       {ECO:0000269|PubMed:23872272}.
CC   -!- INDUCTION: By auxin. {ECO:0000269|PubMed:23872272}.
CC   -!- MISCELLANEOUS: Plants silencing EXPA17 exhibit reduced number of
CC       emerged lateral roots. Plants over-expressing EXPA17 show increased
CC       density of emerged lateral roots. {ECO:0000269|PubMed:23872272}.
CC   -!- SIMILARITY: Belongs to the expansin family. Expansin A subfamily.
CC       {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=EXPANSIN homepage;
CC       URL="http://homes.bio.psu.edu/expansins/";
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DR   EMBL; AF104919; AAC72858.1; -; Genomic_DNA.
DR   EMBL; AL161492; CAB77733.1; -; Genomic_DNA.
DR   EMBL; CP002687; AEE82054.1; -; Genomic_DNA.
DR   PIR; T02010; T02010.
DR   RefSeq; NP_192072.1; NM_116393.2.
DR   AlphaFoldDB; Q9ZSI1; -.
DR   SMR; Q9ZSI1; -.
DR   STRING; 3702.AT4G01630.1; -.
DR   PaxDb; Q9ZSI1; -.
DR   PRIDE; Q9ZSI1; -.
DR   ProteomicsDB; 222416; -.
DR   EnsemblPlants; AT4G01630.1; AT4G01630.1; AT4G01630.
DR   GeneID; 827983; -.
DR   Gramene; AT4G01630.1; AT4G01630.1; AT4G01630.
DR   KEGG; ath:AT4G01630; -.
DR   Araport; AT4G01630; -.
DR   TAIR; locus:2133427; AT4G01630.
DR   eggNOG; ENOG502QS90; Eukaryota.
DR   HOGENOM; CLU_027462_0_1_1; -.
DR   InParanoid; Q9ZSI1; -.
DR   OMA; MNGRNYF; -.
DR   OrthoDB; 1084583at2759; -.
DR   PhylomeDB; Q9ZSI1; -.
DR   PRO; PR:Q9ZSI1; -.
DR   Proteomes; UP000006548; Chromosome 4.
DR   ExpressionAtlas; Q9ZSI1; baseline and differential.
DR   Genevisible; Q9ZSI1; AT.
DR   GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0010311; P:lateral root formation; IMP:UniProtKB.
DR   GO; GO:0009828; P:plant-type cell wall loosening; TAS:UniProtKB.
DR   Gene3D; 2.40.40.10; -; 1.
DR   Gene3D; 2.60.40.760; -; 1.
DR   InterPro; IPR007118; Expan_Lol_pI.
DR   InterPro; IPR002963; Expansin.
DR   InterPro; IPR007112; Expansin/allergen_DPBB_dom.
DR   InterPro; IPR007117; Expansin_CBD.
DR   InterPro; IPR036749; Expansin_CBD_sf.
DR   InterPro; IPR009009; RlpA-like_DPBB.
DR   InterPro; IPR036908; RlpA-like_sf.
DR   PANTHER; PTHR31867; PTHR31867; 1.
DR   Pfam; PF03330; DPBB_1; 1.
DR   Pfam; PF01357; Expansin_C; 1.
DR   PRINTS; PR01226; EXPANSIN.
DR   PRINTS; PR01225; EXPANSNFAMLY.
DR   SMART; SM00837; DPBB_1; 1.
DR   SUPFAM; SSF49590; SSF49590; 1.
DR   SUPFAM; SSF50685; SSF50685; 1.
DR   PROSITE; PS50843; EXPANSIN_CBD; 1.
DR   PROSITE; PS50842; EXPANSIN_EG45; 1.
PE   2: Evidence at transcript level;
KW   Cell wall; Cell wall biogenesis/degradation; Membrane; Reference proteome;
KW   Secreted; Signal.
FT   SIGNAL          1..26
FT                   /evidence="ECO:0000255"
FT   CHAIN           27..255
FT                   /note="Putative expansin-A17"
FT                   /id="PRO_0000008698"
FT   DOMAIN          46..161
FT                   /note="Expansin-like EG45"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00079"
FT   DOMAIN          171..251
FT                   /note="Expansin-like CBD"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00078"
SQ   SEQUENCE   255 AA;  27715 MW;  A33A62D3522A530F CRC64;
     MTKIFSLLVA MIFSTMFFMK ISSVSAGWLQ AHATFYGGSD ASGTMGGACG YGNLYTDGYK
     TNTAALSTAL FNDGKSCGGC YQILCDATKV PQWCLKGKSI TITATNFCPP NFAQASDNGG
     WCNPPRPHFD MAQPAFLTIA KYKAGIVPIL YKKVGCRRSG GMRFTINGRN YFELVLISNV
     AGGGEISKVW IKGSKSNKWE TMSRNWGANY QSNTYLNGQS LSFKVQLSDG SIKAALNVVP
     SNWRFGQSFK SNVNF
 
 
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