EXP21_ARATH
ID EXP21_ARATH Reviewed; 262 AA.
AC Q9FL81; Q84WR9;
DT 05-MAR-2002, integrated into UniProtKB/Swiss-Prot.
DT 03-OCT-2006, sequence version 3.
DT 03-AUG-2022, entry version 130.
DE RecName: Full=Expansin-A21;
DE Short=AtEXPA21;
DE AltName: Full=Alpha-expansin-21;
DE Short=At-EXP21;
DE Short=AtEx21;
DE AltName: Full=Ath-ExpAlpha-1.20;
DE Flags: Precursor;
GN Name=EXPA21; Synonyms=EXP21; OrderedLocusNames=At5g39260;
GN ORFNames=K3K3.17, K3K3_110;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9679202; DOI=10.1093/dnares/5.2.131;
RA Kaneko T., Kotani H., Nakamura Y., Sato S., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence
RT features of the regions of 1,381,565 bp covered by twenty one physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:131-145(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NOMENCLATURE.
RX PubMed=15604683; DOI=10.1007/s11103-004-0158-6;
RA Kende H., Bradford K.J., Brummell D.A., Cho H.-T., Cosgrove D.J.,
RA Fleming A.J., Gehring C., Lee Y., McQueen-Mason S.J., Rose J.K.C.,
RA Voesenek L.A.C.;
RT "Nomenclature for members of the expansin superfamily of genes and
RT proteins.";
RL Plant Mol. Biol. 55:311-314(2004).
CC -!- FUNCTION: Causes loosening and extension of plant cell walls by
CC disrupting non-covalent bonding between cellulose microfibrils and
CC matrix glucans. No enzymatic activity has been found (By similarity).
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Secreted, cell wall. Membrane; Peripheral
CC membrane protein.
CC -!- SIMILARITY: Belongs to the expansin family. Expansin A subfamily.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB09381.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=EXPANSIN homepage;
CC URL="http://homes.bio.psu.edu/expansins/";
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DR EMBL; AB010694; BAB09381.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002688; AED94413.1; -; Genomic_DNA.
DR EMBL; BT002841; AAO22660.1; -; mRNA.
DR RefSeq; NP_198742.2; NM_123288.3.
DR AlphaFoldDB; Q9FL81; -.
DR SMR; Q9FL81; -.
DR STRING; 3702.AT5G39260.1; -.
DR PaxDb; Q9FL81; -.
DR PRIDE; Q9FL81; -.
DR ProteomicsDB; 222418; -.
DR EnsemblPlants; AT5G39260.1; AT5G39260.1; AT5G39260.
DR GeneID; 833922; -.
DR Gramene; AT5G39260.1; AT5G39260.1; AT5G39260.
DR KEGG; ath:AT5G39260; -.
DR Araport; AT5G39260; -.
DR TAIR; locus:2157215; AT5G39260.
DR eggNOG; ENOG502QQNJ; Eukaryota.
DR HOGENOM; CLU_027462_0_1_1; -.
DR InParanoid; Q9FL81; -.
DR OMA; TAWYDAR; -.
DR OrthoDB; 1081008at2759; -.
DR PhylomeDB; Q9FL81; -.
DR PRO; PR:Q9FL81; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FL81; baseline and differential.
DR Genevisible; Q9FL81; AT.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0009653; P:anatomical structure morphogenesis; IEA:UniProt.
DR GO; GO:0009664; P:plant-type cell wall organization; IEA:InterPro.
DR Gene3D; 2.40.40.10; -; 1.
DR Gene3D; 2.60.40.760; -; 1.
DR InterPro; IPR007118; Expan_Lol_pI.
DR InterPro; IPR002963; Expansin.
DR InterPro; IPR007112; Expansin/allergen_DPBB_dom.
DR InterPro; IPR007117; Expansin_CBD.
DR InterPro; IPR036749; Expansin_CBD_sf.
DR InterPro; IPR009009; RlpA-like_DPBB.
DR InterPro; IPR036908; RlpA-like_sf.
DR PANTHER; PTHR31867; PTHR31867; 1.
DR Pfam; PF03330; DPBB_1; 1.
DR Pfam; PF01357; Expansin_C; 1.
DR PRINTS; PR01226; EXPANSIN.
DR PRINTS; PR01225; EXPANSNFAMLY.
DR SMART; SM00837; DPBB_1; 1.
DR SUPFAM; SSF49590; SSF49590; 1.
DR SUPFAM; SSF50685; SSF50685; 1.
DR PROSITE; PS50843; EXPANSIN_CBD; 1.
DR PROSITE; PS50842; EXPANSIN_EG45; 1.
PE 2: Evidence at transcript level;
KW Cell wall; Cell wall biogenesis/degradation; Membrane; Reference proteome;
KW Secreted; Signal.
FT SIGNAL 1..29
FT /evidence="ECO:0000255"
FT CHAIN 30..262
FT /note="Expansin-A21"
FT /id="PRO_0000008701"
FT DOMAIN 64..169
FT /note="Expansin-like EG45"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00079"
FT DOMAIN 179..258
FT /note="Expansin-like CBD"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00078"
SQ SEQUENCE 262 AA; 28134 MW; 32D88382879D91B1 CRC64;
MKLLEKMTYV ECFMIIMATW FMFISYSHGA NVAAAPGTNG LDTAWYDARA AYYGDIHGGG
TELEGACGYG DLNKHGYGLA TAALSTALFN SGASCGACYE IMCSPNPQGC LSGSIKITAT
DLCPPGSAWC YLPNKHFDLS LPMFIKIAQV KAKMVPVRYR RVPCAKTGGV KFEVKGNPNI
LTILPYNVGG AGDIIAVSAK GSKTAWVVMS RYWGQNWTTN VNLTGQSVSL RVTTSDGITK
DFTDVMPASW GFGQTFDGKT NF