EXP24_ARATH
ID EXP24_ARATH Reviewed; 312 AA.
AC Q9FL76; F4KEE0; Q4PSD6;
DT 05-MAR-2002, integrated into UniProtKB/Swiss-Prot.
DT 05-MAR-2002, sequence version 2.
DT 03-AUG-2022, entry version 138.
DE RecName: Full=Expansin-A24;
DE Short=AtEXPA24;
DE AltName: Full=Alpha-expansin-24;
DE Short=At-EXP24;
DE Short=AtEx24;
DE AltName: Full=Ath-ExpAlpha-1.19;
DE Flags: Precursor;
GN Name=EXPA24; Synonyms=EXP24; OrderedLocusNames=At5g39310;
GN ORFNames=K3K3.22, K3K3_160;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9679202; DOI=10.1093/dnares/5.2.131;
RA Kaneko T., Kotani H., Nakamura Y., Sato S., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence
RT features of the regions of 1,381,565 bp covered by twenty one physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:131-145(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 17-312.
RC STRAIN=cv. Columbia;
RA Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NOMENCLATURE.
RX PubMed=15604683; DOI=10.1007/s11103-004-0158-6;
RA Kende H., Bradford K.J., Brummell D.A., Cho H.-T., Cosgrove D.J.,
RA Fleming A.J., Gehring C., Lee Y., McQueen-Mason S.J., Rose J.K.C.,
RA Voesenek L.A.C.;
RT "Nomenclature for members of the expansin superfamily of genes and
RT proteins.";
RL Plant Mol. Biol. 55:311-314(2004).
CC -!- FUNCTION: Causes loosening and extension of plant cell walls by
CC disrupting non-covalent bonding between cellulose microfibrils and
CC matrix glucans. No enzymatic activity has been found (By similarity).
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Secreted, cell wall. Membrane; Peripheral
CC membrane protein.
CC -!- SIMILARITY: Belongs to the expansin family. Expansin A subfamily.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB09386.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=EXPANSIN homepage;
CC URL="http://homes.bio.psu.edu/expansins/";
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DR EMBL; AB010694; BAB09386.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED94418.2; -; Genomic_DNA.
DR EMBL; DQ056700; AAY78846.1; -; mRNA.
DR RefSeq; NP_198747.2; NM_123293.2.
DR AlphaFoldDB; Q9FL76; -.
DR SMR; Q9FL76; -.
DR STRING; 3702.AT5G39310.1; -.
DR PaxDb; Q9FL76; -.
DR PRIDE; Q9FL76; -.
DR ProteomicsDB; 222245; -.
DR EnsemblPlants; AT5G39310.1; AT5G39310.1; AT5G39310.
DR GeneID; 833927; -.
DR Gramene; AT5G39310.1; AT5G39310.1; AT5G39310.
DR KEGG; ath:AT5G39310; -.
DR Araport; AT5G39310; -.
DR eggNOG; ENOG502QQNJ; Eukaryota.
DR HOGENOM; CLU_027462_0_1_1; -.
DR InParanoid; Q9FL76; -.
DR OMA; GNPHFLM; -.
DR OrthoDB; 856613at2759; -.
DR PhylomeDB; Q9FL76; -.
DR PRO; PR:Q9FL76; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FL76; baseline and differential.
DR Genevisible; Q9FL76; AT.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0009653; P:anatomical structure morphogenesis; IEA:UniProt.
DR GO; GO:0009664; P:plant-type cell wall organization; IEA:InterPro.
DR Gene3D; 2.40.40.10; -; 1.
DR Gene3D; 2.60.40.760; -; 1.
DR InterPro; IPR007118; Expan_Lol_pI.
DR InterPro; IPR002963; Expansin.
DR InterPro; IPR007112; Expansin/allergen_DPBB_dom.
DR InterPro; IPR007117; Expansin_CBD.
DR InterPro; IPR036749; Expansin_CBD_sf.
DR InterPro; IPR009009; RlpA-like_DPBB.
DR InterPro; IPR036908; RlpA-like_sf.
DR PANTHER; PTHR31867; PTHR31867; 1.
DR Pfam; PF03330; DPBB_1; 1.
DR Pfam; PF01357; Expansin_C; 1.
DR PRINTS; PR01226; EXPANSIN.
DR PRINTS; PR01225; EXPANSNFAMLY.
DR SMART; SM00837; DPBB_1; 1.
DR SUPFAM; SSF49590; SSF49590; 1.
DR SUPFAM; SSF50685; SSF50685; 1.
DR PROSITE; PS50843; EXPANSIN_CBD; 1.
DR PROSITE; PS50842; EXPANSIN_EG45; 1.
PE 2: Evidence at transcript level;
KW Cell wall; Cell wall biogenesis/degradation; Membrane; Reference proteome;
KW Repeat; Secreted; Signal.
FT SIGNAL 1..27
FT /evidence="ECO:0000255"
FT CHAIN 28..312
FT /note="Expansin-A24"
FT /id="PRO_0000008704"
FT REPEAT 42..47
FT /note="1"
FT REPEAT 48..53
FT /note="2"
FT REPEAT 54..59
FT /note="3"
FT REPEAT 60..65
FT /note="4"
FT REPEAT 66..71
FT /note="5"
FT REPEAT 72..77
FT /note="6"
FT DOMAIN 108..218
FT /note="Expansin-like EG45"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00079"
FT DOMAIN 228..307
FT /note="Expansin-like CBD"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00078"
FT REGION 31..86
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 42..77
FT /note="6 X 6 AA tandem repeats of H-P-S-H-G-A"
SQ SEQUENCE 312 AA; 33775 MW; FB3C64A2D529644B CRC64;
MELLKRKLYA KILMMVMVIW IAPMTNGHDH ASHVPGGRPG AHPSHGAHPA HGAHPSHGAH
PSHGAHPSHG AHPSHGALPS HGGQVPHSGW GHGRATFYGD INGGETQQGA CGYGDLHKQG
YGLETAALST ALFNNGSRCG ACYEIMCEHA PQWCLPGSIK ITATNFCPPD FTKPNDNWCN
PPQKHFDLSQ PMFLKIAKYK AGVVPVKFRR VPCAKIGGVK FEIKGNPHFL MILPYNVGGA
GAVRAMQIKG TRTQWIAMKK NWGQIWSTGV VLTGQCLSFR LTTSDGVMKE FIDVTPPDWK
CNGQSFDGKV NF
