EXP25_ARATH
ID EXP25_ARATH Reviewed; 276 AA.
AC Q9FL77; F4KED9;
DT 05-MAR-2002, integrated into UniProtKB/Swiss-Prot.
DT 05-MAR-2002, sequence version 2.
DT 03-AUG-2022, entry version 131.
DE RecName: Full=Expansin-A25;
DE Short=AtEXPA25;
DE AltName: Full=Alpha-expansin-25;
DE Short=At-EXP25;
DE Short=AtEx25;
DE AltName: Full=Ath-ExpAlpha-1.18;
DE Flags: Precursor;
GN Name=EXPA25; Synonyms=EXP25; OrderedLocusNames=At5g39300;
GN ORFNames=K3K3.21, K3K3_150;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9679202; DOI=10.1093/dnares/5.2.131;
RA Kaneko T., Kotani H., Nakamura Y., Sato S., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence
RT features of the regions of 1,381,565 bp covered by twenty one physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:131-145(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14993207; DOI=10.1101/gr.1515604;
RA Castelli V., Aury J.-M., Jaillon O., Wincker P., Clepet C., Menard M.,
RA Cruaud C., Quetier F., Scarpelli C., Schaechter V., Temple G., Caboche M.,
RA Weissenbach J., Salanoubat M.;
RT "Whole genome sequence comparisons and 'full-length' cDNA sequences: a
RT combined approach to evaluate and improve Arabidopsis genome annotation.";
RL Genome Res. 14:406-413(2004).
RN [4]
RP NOMENCLATURE.
RX PubMed=15604683; DOI=10.1007/s11103-004-0158-6;
RA Kende H., Bradford K.J., Brummell D.A., Cho H.-T., Cosgrove D.J.,
RA Fleming A.J., Gehring C., Lee Y., McQueen-Mason S.J., Rose J.K.C.,
RA Voesenek L.A.C.;
RT "Nomenclature for members of the expansin superfamily of genes and
RT proteins.";
RL Plant Mol. Biol. 55:311-314(2004).
CC -!- FUNCTION: Causes loosening and extension of plant cell walls by
CC disrupting non-covalent bonding between cellulose microfibrils and
CC matrix glucans. No enzymatic activity has been found (By similarity).
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Secreted, cell wall. Membrane; Peripheral
CC membrane protein.
CC -!- SIMILARITY: Belongs to the expansin family. Expansin A subfamily.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB09385.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC Sequence=BX832887; Type=Miscellaneous discrepancy; Note=Sequencing errors.; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=EXPANSIN homepage;
CC URL="http://homes.bio.psu.edu/expansins/";
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DR EMBL; AB010694; BAB09385.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002688; AED94417.2; -; Genomic_DNA.
DR EMBL; BX832887; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; NP_198746.2; NM_123292.2.
DR AlphaFoldDB; Q9FL77; -.
DR SMR; Q9FL77; -.
DR STRING; 3702.AT5G39300.1; -.
DR PaxDb; Q9FL77; -.
DR PRIDE; Q9FL77; -.
DR ProteomicsDB; 222310; -.
DR EnsemblPlants; AT5G39300.1; AT5G39300.1; AT5G39300.
DR GeneID; 833926; -.
DR Gramene; AT5G39300.1; AT5G39300.1; AT5G39300.
DR KEGG; ath:AT5G39300; -.
DR Araport; AT5G39300; -.
DR eggNOG; ENOG502QQNJ; Eukaryota.
DR HOGENOM; CLU_027462_0_1_1; -.
DR InParanoid; Q9FL77; -.
DR OMA; RRVACAN; -.
DR OrthoDB; 856613at2759; -.
DR PhylomeDB; Q9FL77; -.
DR PRO; PR:Q9FL77; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FL77; baseline.
DR Genevisible; Q9FL77; AT.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0009653; P:anatomical structure morphogenesis; IEA:UniProt.
DR GO; GO:0009664; P:plant-type cell wall organization; IEA:InterPro.
DR Gene3D; 2.40.40.10; -; 1.
DR Gene3D; 2.60.40.760; -; 1.
DR InterPro; IPR007118; Expan_Lol_pI.
DR InterPro; IPR002963; Expansin.
DR InterPro; IPR007112; Expansin/allergen_DPBB_dom.
DR InterPro; IPR007117; Expansin_CBD.
DR InterPro; IPR036749; Expansin_CBD_sf.
DR InterPro; IPR009009; RlpA-like_DPBB.
DR InterPro; IPR036908; RlpA-like_sf.
DR PANTHER; PTHR31867; PTHR31867; 1.
DR Pfam; PF03330; DPBB_1; 1.
DR Pfam; PF01357; Expansin_C; 1.
DR PRINTS; PR01226; EXPANSIN.
DR PRINTS; PR01225; EXPANSNFAMLY.
DR SMART; SM00837; DPBB_1; 1.
DR SUPFAM; SSF49590; SSF49590; 1.
DR SUPFAM; SSF50685; SSF50685; 1.
DR PROSITE; PS50843; EXPANSIN_CBD; 1.
DR PROSITE; PS50842; EXPANSIN_EG45; 1.
PE 2: Evidence at transcript level;
KW Cell wall; Cell wall biogenesis/degradation; Membrane; Reference proteome;
KW Secreted; Signal.
FT SIGNAL 1..27
FT /evidence="ECO:0000255"
FT CHAIN 28..276
FT /note="Expansin-A25"
FT /id="PRO_0000008705"
FT DOMAIN 73..183
FT /note="Expansin-like EG45"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00079"
FT DOMAIN 193..272
FT /note="Expansin-like CBD"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00078"
SQ SEQUENCE 276 AA; 30491 MW; 8EACDE90BD6A9DD6 CRC64;
MKLLEQMVYV ECFMIIMATL LVSMSYGHRA MINDVAEAPV IDNVGSPTNG LDSSWYDARA
TFYGDIHGGE TQQGACGYGD LFKQGYGLET AALSTALFNE GYTCGACYQI MCVHDPQWCL
PGTIKITATN FCPPDYSKTE GVWCNPPQKH FDLSLPMFLK IAQYKAGVVP VKYRRISCAR
TGGVKFETKG NPYFLMILPY NVGGAGDIKL MQVKGDKTGW ITMQKNWGQN WTTGVNLTGQ
GISFRVTTSD GVTKDFNNVM PNNWGFGQTF DGKINF
