EXP26_ORYSJ
ID EXP26_ORYSJ Reviewed; 290 AA.
AC Q2QP13; B7EJ87; Q8H276; Q946H6;
DT 03-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 24-JAN-2006, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Expansin-A26;
DE AltName: Full=Alpha-expansin-26;
DE AltName: Full=OsEXP26;
DE AltName: Full=OsEXPA26;
DE AltName: Full=OsaEXPa1.29;
DE Flags: Precursor;
GN Name=EXPA26; Synonyms=EXP26;
GN OrderedLocusNames=Os12g0546800, LOC_Os12g36040;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
RX PubMed=12428004; DOI=10.1104/pp.008888;
RA Lee Y., Kende H.;
RT "Expression of alpha-expansin and expansin-like genes in deepwater rice.";
RL Plant Physiol. 130:1396-1405(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [7]
RP NOMENCLATURE.
RX PubMed=15604683; DOI=10.1007/s11103-004-0158-6;
RA Kende H., Bradford K.J., Brummell D.A., Cho H.-T., Cosgrove D.J.,
RA Fleming A.J., Gehring C., Lee Y., McQueen-Mason S.J., Rose J.K.C.,
RA Voesenek L.A.C.;
RT "Nomenclature for members of the expansin superfamily of genes and
RT proteins.";
RL Plant Mol. Biol. 55:311-314(2004).
RN [8]
RP TISSUE SPECIFICITY.
RX PubMed=16267395;
RA Shin J.-H., Jeong D.-H., Park M.C., An G.;
RT "Characterization and transcriptional expression of the alpha-expansin gene
RT family in rice.";
RL Mol. Cells 20:210-218(2005).
CC -!- FUNCTION: May cause loosening and extension of plant cell walls by
CC disrupting non-covalent bonding between cellulose microfibrils and
CC matrix glucans. No enzymatic activity has been found. May be required
CC for rapid internodal elongation in deepwater rice during submergence
CC (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Secreted, cell wall {ECO:0000250}. Membrane
CC {ECO:0000250}; Peripheral membrane protein {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed in flowers.
CC {ECO:0000269|PubMed:16267395}.
CC -!- SIMILARITY: Belongs to the expansin family. Expansin A subfamily.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAL24497.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC Sequence=AAM52408.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC -!- WEB RESOURCE: Name=EXPANSIN homepage;
CC URL="http://homes.bio.psu.edu/expansins/";
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DR EMBL; AF394561; AAL24497.1; ALT_INIT; Genomic_DNA.
DR EMBL; AY100692; AAM52408.1; ALT_INIT; mRNA.
DR EMBL; DP000011; ABA98863.1; -; Genomic_DNA.
DR EMBL; AP008218; BAF29984.1; -; Genomic_DNA.
DR EMBL; AP014968; BAT17537.1; -; Genomic_DNA.
DR EMBL; AK071328; BAG92434.1; -; mRNA.
DR RefSeq; XP_015619553.1; XM_015764067.1.
DR AlphaFoldDB; Q2QP13; -.
DR SMR; Q2QP13; -.
DR STRING; 4530.OS12T0546800-01; -.
DR PaxDb; Q2QP13; -.
DR PRIDE; Q2QP13; -.
DR EnsemblPlants; Os12t0546800-01; Os12t0546800-01; Os12g0546800.
DR GeneID; 4352454; -.
DR Gramene; Os12t0546800-01; Os12t0546800-01; Os12g0546800.
DR KEGG; osa:4352454; -.
DR eggNOG; ENOG502QR06; Eukaryota.
DR HOGENOM; CLU_027462_0_2_1; -.
DR InParanoid; Q2QP13; -.
DR OMA; CGYKDAD; -.
DR OrthoDB; 754048at2759; -.
DR Proteomes; UP000000763; Chromosome 12.
DR Proteomes; UP000059680; Chromosome 12.
DR Genevisible; Q2QP13; OS.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0009653; P:anatomical structure morphogenesis; IEA:UniProt.
DR GO; GO:0009664; P:plant-type cell wall organization; IEA:InterPro.
DR Gene3D; 2.40.40.10; -; 1.
DR Gene3D; 2.60.40.760; -; 1.
DR InterPro; IPR007118; Expan_Lol_pI.
DR InterPro; IPR002963; Expansin.
DR InterPro; IPR007112; Expansin/allergen_DPBB_dom.
DR InterPro; IPR007117; Expansin_CBD.
DR InterPro; IPR036749; Expansin_CBD_sf.
DR InterPro; IPR009009; RlpA-like_DPBB.
DR InterPro; IPR036908; RlpA-like_sf.
DR PANTHER; PTHR31867; PTHR31867; 1.
DR Pfam; PF03330; DPBB_1; 1.
DR Pfam; PF01357; Expansin_C; 1.
DR PRINTS; PR01226; EXPANSIN.
DR PRINTS; PR01225; EXPANSNFAMLY.
DR SMART; SM00837; DPBB_1; 1.
DR SUPFAM; SSF49590; SSF49590; 1.
DR SUPFAM; SSF50685; SSF50685; 1.
DR PROSITE; PS50843; EXPANSIN_CBD; 1.
DR PROSITE; PS50842; EXPANSIN_EG45; 1.
PE 2: Evidence at transcript level;
KW Cell wall; Cell wall biogenesis/degradation; Glycoprotein; Membrane;
KW Reference proteome; Secreted; Signal.
FT SIGNAL 1..29
FT /evidence="ECO:0000255"
FT CHAIN 30..290
FT /note="Expansin-A26"
FT /id="PRO_0000252005"
FT DOMAIN 101..196
FT /note="Expansin-like EG45"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00079"
FT DOMAIN 206..286
FT /note="Expansin-like CBD"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00078"
FT REGION 45..67
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 250
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 290 AA; 30047 MW; D0C5C7F08A7E34E4 CRC64;
MDTTTTMAPL PLLTTTSLLL FFFLASSFAA DVVVAGGGGG GGGYDGGGDG EGGGGGDGEG
GGGGGGAKMP HVNHGRYKCG PWVDGHATFY GGRDASGTTE GGACGYKDAD GYGAMTAAVS
PALFDNGAGC GACYELKGDS GKTVVVTATN QAPPPVNGMK GEHFDLTMPA FLSIAEEKLG
VVPVSYRKVA CVRQGGIKYT ITGNPSYNMV MVKNVGGAGD VVKLTVKGTK RVKWTPLQRS
WGQLWKTEAN LTGESLTFRV MTGDHRKATS WRVAPRDWTY DNTYQAKKNF
