F149B_RAT
ID F149B_RAT Reviewed; 482 AA.
AC Q5PQL8;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 04-JAN-2005, sequence version 1.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Primary cilium assembly protein FAM149B1 {ECO:0000305};
GN Name=Fam149b1 {ECO:0000312|RGD:1359592};
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Testis;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- FUNCTION: Involved in the localization of proteins to the cilium and
CC cilium assembly. Indirectly regulates the signaling functions of the
CC cilium, being required for normal SHH/smoothened signaling and proper
CC development. {ECO:0000250|UniProtKB:Q96BN6}.
CC -!- SUBUNIT: Interacts with TBC1D32; may play a role in cilium assembly.
CC {ECO:0000250|UniProtKB:Q96BN6}.
CC -!- SUBCELLULAR LOCATION: Cell projection, cilium
CC {ECO:0000250|UniProtKB:Q96BN6}.
CC -!- SIMILARITY: Belongs to the FAM149 family. {ECO:0000305}.
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DR EMBL; BC087126; AAH87126.1; -; mRNA.
DR RefSeq; NP_001013900.1; NM_001013878.1.
DR AlphaFoldDB; Q5PQL8; -.
DR STRING; 10116.ENSRNOP00000063752; -.
DR PaxDb; Q5PQL8; -.
DR Ensembl; ENSRNOT00000065858; ENSRNOP00000063752; ENSRNOG00000006554.
DR GeneID; 289900; -.
DR KEGG; rno:289900; -.
DR UCSC; RGD:1359592; rat.
DR CTD; 317662; -.
DR RGD; 1359592; Fam149b1.
DR eggNOG; ENOG502QVD4; Eukaryota.
DR GeneTree; ENSGT00530000063727; -.
DR HOGENOM; CLU_018180_1_1_1; -.
DR InParanoid; Q5PQL8; -.
DR PRO; PR:Q5PQL8; -.
DR Proteomes; UP000002494; Chromosome 15.
DR Bgee; ENSRNOG00000006554; Expressed in kidney and 20 other tissues.
DR ExpressionAtlas; Q5PQL8; baseline and differential.
DR Genevisible; Q5PQL8; RN.
DR GO; GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
DR GO; GO:0060271; P:cilium assembly; ISO:RGD.
DR GO; GO:0061512; P:protein localization to cilium; ISO:RGD.
DR InterPro; IPR022194; DUF3719.
DR InterPro; IPR039630; FAM149.
DR PANTHER; PTHR31997; PTHR31997; 1.
DR Pfam; PF12516; DUF3719; 1.
PE 2: Evidence at transcript level;
KW Cell projection; Cilium; Cilium biogenesis/degradation; Reference proteome.
FT CHAIN 1..482
FT /note="Primary cilium assembly protein FAM149B1"
FT /id="PRO_0000319935"
FT REGION 314..344
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 356..379
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 391..482
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 314..342
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 425..446
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 461..482
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 482 AA; 53218 MW; 92A278FA32A67F71 CRC64;
MELDQNATEK VKAMFTAIDE LLYEQKPSVH TQSLQKECQQ WASSFPHLRI LGRQIITSSE
GYGLYPRSPS AVSASHEAIL PQERESTIFG IRGKKLHFSS SYKASPSTKA SGSSADGEEA
DCIIFSEGII EEYLAFDHTD MEEGFHGNKS EAATEKQKLG YPPIAPFYCM KEDVLAYVFD
NVWSKAVGCM EQLTRSHWEG FASDDESNVE ITRLDSGSPY MLNEQQPLVL PRVPQSKVMS
VTSNPMNFCQ ASGHQPNVNG LLIHGMPLQP RNLSLMDKLL DLDDKLLMRP GSSSVLSNRN
WPNRAMELST SSLSYTTQSA RRRNPPPRTL HPISTSHSRT GTPWPAEEIL RGPRLPMTAD
SLSSPSPMTM GRNNLLPPIG TADVEHLSIL GSQRPTKPHG DSSRARSAAV DEPNQQPQER
LLLPVFSRPN TTQSFLPETQ YRSSCASECP HHARPGRGSA GPQSHGSTKP QSRGGPISRT
RQ