F50AA_XENLA
ID F50AA_XENLA Reviewed; 340 AA.
AC Q2VPH1; Q8AVT5;
DT 08-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 10-JAN-2006, sequence version 1.
DT 03-AUG-2022, entry version 39.
DE RecName: Full=Protein FAM50A-A;
GN Name=fam50a-a; Synonyms=fam50-a;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Eye, and Neurula;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (NOV-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Probably involved in the regulation of pre-mRNA splicing.
CC {ECO:0000250|UniProtKB:Q568K9}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q14320}.
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DR EMBL; BC041272; AAH41272.1; -; mRNA.
DR EMBL; BC108795; AAI08796.1; -; mRNA.
DR RefSeq; NP_001080084.1; NM_001086615.1.
DR AlphaFoldDB; Q2VPH1; -.
DR PRIDE; Q2VPH1; -.
DR DNASU; 379776; -.
DR GeneID; 379776; -.
DR KEGG; xla:379776; -.
DR CTD; 379776; -.
DR Xenbase; XB-GENE-970300; fam50a.L.
DR OrthoDB; 1061864at2759; -.
DR Proteomes; UP000186698; Chromosome 8L.
DR Bgee; 379776; Expressed in lung and 19 other tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR InterPro; IPR007005; XAP5.
DR PANTHER; PTHR12722; PTHR12722; 1.
DR Pfam; PF04921; XAP5; 1.
PE 2: Evidence at transcript level;
KW mRNA processing; mRNA splicing; Nucleus; Reference proteome.
FT CHAIN 1..340
FT /note="Protein FAM50A-A"
FT /id="PRO_0000326509"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 123..178
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 124..143
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 158..178
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 156
FT /note="Missing (in Ref. 1; AAH41272)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 340 AA; 40334 MW; 90034E03E636CC57 CRC64;
MAQYKGAASE AGRAMQLMKK REKQREQLEQ MKLKIAEENV VKANINKKFS AHYDAVEAEL
KSSTVGLVTL NDMKAKQEAL VKEREKQLAK KEQFKDLQLM LEKQRERERK KEQKRKIASL
SFNLEEDEEC EDEEGEEEES DKEDPPEEKK KKKKKKLGKN PDVDTSFLPD RDREEEENRL
REELRQEWEH KQEKIKSEEI EITFSYWDGS GHRRTVKMKK GNSIQQFLQK ALESLRKDFS
ELRSAGVEQL MYIKEDLIIP HHHSFYDFIV TKARGKSGPL FNFDVHEDVR LLSDATVEKD
ESHAGKVVLR SWYEKNKHIF PASRWEPYDP EKKWDKYTIR