FA78B_MOUSE
ID FA78B_MOUSE Reviewed; 261 AA.
AC Q8BQN5; A2RSM0; Q8CC61;
DT 12-DEC-2006, integrated into UniProtKB/Swiss-Prot.
DT 12-DEC-2006, sequence version 2.
DT 03-AUG-2022, entry version 115.
DE RecName: Full=Protein FAM78B;
GN Name=Fam78b;
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=C57BL/6J; TISSUE=Corpus striatum, and Epididymis;
RX PubMed=16141072; DOI=10.1126/science.1112014;
RA Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
RA Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
RA Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
RA Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
RA Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
RA Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
RA Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
RA Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
RA Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
RA Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
RA Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
RA Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
RA Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
RA Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
RA Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
RA Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
RA Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
RA Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
RA Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
RA Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
RA van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
RA Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
RA Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
RA Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
RA Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
RA Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
RA Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
RA Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
RA Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
RT "The transcriptional landscape of the mammalian genome.";
RL Science 309:1559-1563(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- SIMILARITY: Belongs to the FAM78 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAC28491.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC Sequence=BAC33132.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC Sequence=BAE25775.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AK033840; BAC28491.1; ALT_INIT; mRNA.
DR EMBL; AK047703; BAC33132.1; ALT_INIT; mRNA.
DR EMBL; AK144212; BAE25775.1; ALT_INIT; mRNA.
DR EMBL; BC132161; AAI32162.1; -; mRNA.
DR EMBL; BC132525; AAI32526.1; -; mRNA.
DR CCDS; CCDS35764.1; -.
DR RefSeq; NP_001153733.1; NM_001160261.1.
DR RefSeq; NP_001153734.1; NM_001160262.1.
DR RefSeq; NP_780670.2; NM_175461.4.
DR RefSeq; XP_006496852.1; XM_006496789.1.
DR AlphaFoldDB; Q8BQN5; -.
DR STRING; 10090.ENSMUSP00000131620; -.
DR MaxQB; Q8BQN5; -.
DR PaxDb; Q8BQN5; -.
DR PRIDE; Q8BQN5; -.
DR ProteomicsDB; 275840; -.
DR Antibodypedia; 34334; 125 antibodies from 17 providers.
DR Ensembl; ENSMUST00000126198; ENSMUSP00000122636; ENSMUSG00000060568.
DR Ensembl; ENSMUST00000156025; ENSMUSP00000117572; ENSMUSG00000060568.
DR Ensembl; ENSMUST00000165874; ENSMUSP00000131620; ENSMUSG00000060568.
DR Ensembl; ENSMUST00000190081; ENSMUSP00000139628; ENSMUSG00000060568.
DR GeneID; 226610; -.
DR KEGG; mmu:226610; -.
DR UCSC; uc007dks.2; mouse.
DR CTD; 149297; -.
DR MGI; MGI:2443050; Fam78b.
DR VEuPathDB; HostDB:ENSMUSG00000060568; -.
DR eggNOG; ENOG502QPXK; Eukaryota.
DR GeneTree; ENSGT00390000018059; -.
DR HOGENOM; CLU_085745_0_0_1; -.
DR InParanoid; Q8BQN5; -.
DR OMA; IQACTHM; -.
DR OrthoDB; 958650at2759; -.
DR PhylomeDB; Q8BQN5; -.
DR TreeFam; TF329533; -.
DR BioGRID-ORCS; 226610; 2 hits in 72 CRISPR screens.
DR ChiTaRS; Fam78b; mouse.
DR PRO; PR:Q8BQN5; -.
DR Proteomes; UP000000589; Chromosome 1.
DR RNAct; Q8BQN5; protein.
DR Bgee; ENSMUSG00000060568; Expressed in cortical plate and 95 other tissues.
DR ExpressionAtlas; Q8BQN5; baseline and differential.
DR Genevisible; Q8BQN5; MM.
DR InterPro; IPR029638; FAM78.
DR InterPro; IPR029639; FAM78B.
DR PANTHER; PTHR31655; PTHR31655; 1.
DR PANTHER; PTHR31655:SF0; PTHR31655:SF0; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..261
FT /note="Protein FAM78B"
FT /id="PRO_0000265115"
SQ SEQUENCE 261 AA; 29835 MW; C22AA46C66136565 CRC64;
MGCIQSITCK ARIRRENIVV YDVCATIDQC PTRIEETSPI VLRYKTPYFK ASARVVMPPI
PRHETWVVGW IQACNQMEFF NTYSDLGMSS WELPDLREGR VKAISDSDGV SYPWYGNTTE
TVTLVGPTNK ISRFSVSMND NFYPSVTWAV PVSDSNVPLL TRIKRDQSFT TWLVAMNTTT
KEKIILQTIK WRMRVDIEVD PLQLLGQRAR LVGRTQQEQP RILSRMEPIP PNALVKPNAN
DAQVLMWRPK RGPPLVVIPP K