FABP1_CAEEL
ID FABP1_CAEEL Reviewed; 159 AA.
AC Q20223;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 1.
DT 03-AUG-2022, entry version 131.
DE RecName: Full=Fatty acid-binding protein homolog 1;
DE AltName: Full=Lipid-binding protein 1;
DE Flags: Precursor;
GN Name=lbp-1; ORFNames=F40F4.3;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
RN [2]
RP FUNCTION, SUBCELLULAR LOCATION, AND TISSUE SPECIFICITY.
RX PubMed=10693745; DOI=10.1016/s0166-6851(99)00179-6;
RA Plenefisch J., Xiao H., Mei B., Geng J., Komuniecki P.R., Komuniecki R.;
RT "Secretion of a novel class of iFABPs in nematodes: coordinate use of the
RT Ascaris/Caenorhabditis model systems.";
RL Mol. Biochem. Parasitol. 105:223-236(2000).
CC -!- FUNCTION: May play a role in sequestering potentially toxic fatty acids
CC and their peroxidation products, or it may be involved in the
CC maintenance of the impermeable lipid layer of the eggshell.
CC {ECO:0000269|PubMed:10693745}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000269|PubMed:10693745}. Note=From
CC the hypodermis into the perivitelline fluid of the developing embryo
CC prior to hatching.
CC -!- TISSUE SPECIFICITY: First detected in hypodermal precursor cells at the
CC time of gastrulation. From the two-fold stage through to three-fold
CC stages, expression is localized exclusively to hyp-7 but disappears in
CC newly hatched L1s and subsequent developmental stages. Expression from
CC L1 to adult stages is found in a single neuron in the ventral cord with
CC a process into the nerve ring. {ECO:0000269|PubMed:10693745}.
CC -!- DOMAIN: Forms a beta-barrel structure that accommodates hydrophobic
CC ligands in its interior. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the calycin superfamily. Fatty-acid binding
CC protein (FABP) family. {ECO:0000305}.
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DR EMBL; FO081243; CCD70142.1; -; Genomic_DNA.
DR PIR; T16309; T16309.
DR RefSeq; NP_508557.1; NM_076156.5.
DR AlphaFoldDB; Q20223; -.
DR SMR; Q20223; -.
DR BioGRID; 45557; 17.
DR DIP; DIP-24433N; -.
DR IntAct; Q20223; 2.
DR STRING; 6239.F40F4.3.1; -.
DR World-2DPAGE; 0011:Q20223; -.
DR EPD; Q20223; -.
DR PaxDb; Q20223; -.
DR PeptideAtlas; Q20223; -.
DR EnsemblMetazoa; F40F4.3.1; F40F4.3.1; WBGene00002253.
DR GeneID; 180616; -.
DR KEGG; cel:CELE_F40F4.3; -.
DR UCSC; F40F4.3.1; c. elegans.
DR CTD; 180616; -.
DR WormBase; F40F4.3; CE04533; WBGene00002253; lbp-1.
DR eggNOG; KOG4015; Eukaryota.
DR GeneTree; ENSGT00390000007345; -.
DR HOGENOM; CLU_113772_2_1_1; -.
DR InParanoid; Q20223; -.
DR OMA; KFYGKFD; -.
DR OrthoDB; 1556612at2759; -.
DR PhylomeDB; Q20223; -.
DR PRO; PR:Q20223; -.
DR Proteomes; UP000001940; Chromosome X.
DR Bgee; WBGene00002253; Expressed in embryo and 3 other tissues.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0008289; F:lipid binding; IEA:UniProtKB-KW.
DR Gene3D; 2.40.128.20; -; 1.
DR InterPro; IPR012674; Calycin.
DR InterPro; IPR000463; Fatty_acid-bd.
DR InterPro; IPR040094; Lbp1-4.
DR PANTHER; PTHR22725; PTHR22725; 1.
DR PRINTS; PR00178; FATTYACIDBP.
DR SUPFAM; SSF50814; SSF50814; 1.
DR PROSITE; PS00214; FABP; 1.
PE 2: Evidence at transcript level;
KW Lipid-binding; Reference proteome; Secreted; Signal; Transport.
FT SIGNAL 1..17
FT /evidence="ECO:0000255"
FT CHAIN 18..159
FT /note="Fatty acid-binding protein homolog 1"
FT /id="PRO_0000008737"
SQ SEQUENCE 159 AA; 18284 MW; 6676E64C581458CF CRC64;
MCAKIALLLV LVGAASAAVL PDKFYGTFDL DHSENFDEYL TAKGYGWFTR KLVTFATFKK
VFTKTSNKNL FDYSNLTSKK DVHYKNVQLG KAFQGEGLDS TKHEITFTLK DGHLFEHHKP
LEGGDAKEET YEYLFDKEFL LVRMSFNGVE GRRFYKRLP