FAM50_SCHPO
ID FAM50_SCHPO Reviewed; 288 AA.
AC Q7LKZ5;
DT 04-NOV-2008, integrated into UniProtKB/Swiss-Prot.
DT 21-AUG-2007, sequence version 2.
DT 25-MAY-2022, entry version 82.
DE RecName: Full=FAM50 family protein C1020.12c;
GN Name=xap5; ORFNames=SPCC1020.12c;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
RN [2]
RP SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
RX PubMed=16823372; DOI=10.1038/nbt1222;
RA Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S.,
RA Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S.,
RA Yoshida M.;
RT "ORFeome cloning and global analysis of protein localization in the fission
RT yeast Schizosaccharomyces pombe.";
RL Nat. Biotechnol. 24:841-847(2006).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:16823372}.
CC -!- SIMILARITY: Belongs to the FAM50 family. {ECO:0000305}.
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DR EMBL; CU329672; CAA20659.2; -; Genomic_DNA.
DR RefSeq; NP_587947.2; NM_001022938.2.
DR AlphaFoldDB; Q7LKZ5; -.
DR BioGRID; 275294; 460.
DR STRING; 4896.SPCC1020.12c.1; -.
DR iPTMnet; Q7LKZ5; -.
DR MaxQB; Q7LKZ5; -.
DR PaxDb; Q7LKZ5; -.
DR PRIDE; Q7LKZ5; -.
DR EnsemblFungi; SPCC1020.12c.1; SPCC1020.12c.1:pep; SPCC1020.12c.
DR GeneID; 2538710; -.
DR KEGG; spo:SPCC1020.12c; -.
DR PomBase; SPCC1020.12c; xap5.
DR VEuPathDB; FungiDB:SPCC1020.12c; -.
DR eggNOG; KOG2894; Eukaryota.
DR HOGENOM; CLU_037985_1_0_1; -.
DR InParanoid; Q7LKZ5; -.
DR OMA; DFIWVFL; -.
DR PhylomeDB; Q7LKZ5; -.
DR PRO; PR:Q7LKZ5; -.
DR Proteomes; UP000002485; Chromosome III.
DR GO; GO:0000785; C:chromatin; IDA:PomBase.
DR GO; GO:0005634; C:nucleus; HDA:PomBase.
DR GO; GO:0006325; P:chromatin organization; IMP:PomBase.
DR GO; GO:0045292; P:mRNA cis splicing, via spliceosome; ISS:PomBase.
DR InterPro; IPR007005; XAP5.
DR PANTHER; PTHR12722; PTHR12722; 1.
DR Pfam; PF04921; XAP5; 1.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome.
FT CHAIN 1..288
FT /note="FAM50 family protein C1020.12c"
FT /id="PRO_0000352811"
SQ SEQUENCE 288 AA; 33817 MW; 635A879DC7266904 CRC64;
MSGHTDADEI HEILRNSTTG LVHLKDYQRV KQNIVEKREK HALSTTSTKI KKRKDALSKK
VKQGIKVNKG KLSFGEDEEL ENDDLPLKKV EKKMFMGKDP SADTSFLPDA EREIRENAKR
AEYRKQWLKE QEQIREKEIL IPFIYYDGTS TTYHVRTRLK DSVGHFLADM KQQIPFLKRI
LDMDKFLLVQ SDLIIPHHHE LYYFYINKVQ GRDGLLFDFD KLSCSSPEMV ATTQLPSQCI
PHLVQKSYYL QNRHVFPCVH WEVFDSRKDY SLEKHATDPN AALFYRPS