FARS_CITJU
ID FARS_CITJU Reviewed; 560 AA.
AC Q94JS8;
DT 30-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 71.
DE RecName: Full=(E)-beta-farnesene synthase;
DE Short=CjFS;
DE EC=4.2.3.47;
DE AltName: Full=Terpene synthase 10;
OS Citrus junos (Yuzu) (Citrus ichangensis x Citrus reticulata var. austera).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus.
OX NCBI_TaxID=135197;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AND CATALYTIC ACTIVITY.
RX PubMed=11642326; DOI=10.1248/bpb.24.1171;
RA Maruyama T., Ito M., Honda G.;
RT "Molecular cloning, functional expression and characterization of (E)-beta
RT farnesene synthase from Citrus junos.";
RL Biol. Pharm. Bull. 24:1171-1175(2001).
CC -!- FUNCTION: Sesquiterpene cyclase catalyzing the production of beta-
CC farnesene from farnesyl diphosphate. {ECO:0000269|PubMed:11642326}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2E,6E)-farnesyl diphosphate = (E)-beta-farnesene +
CC diphosphate; Xref=Rhea:RHEA:27425, ChEBI:CHEBI:10418,
CC ChEBI:CHEBI:33019, ChEBI:CHEBI:175763; EC=4.2.3.47;
CC Evidence={ECO:0000269|PubMed:11642326};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC Name=Co(2+); Xref=ChEBI:CHEBI:48828; Evidence={ECO:0000250};
CC Name=Mn(2+); Xref=ChEBI:CHEBI:29035; Evidence={ECO:0000250};
CC -!- PATHWAY: Secondary metabolite biosynthesis; terpenoid biosynthesis.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}.
CC -!- DOMAIN: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for
CC the catalytic activity, presumably through binding to Mg(2+).
CC -!- SIMILARITY: Belongs to the terpene synthase family. {ECO:0000305}.
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DR EMBL; AF374462; AAK54279.1; -; mRNA.
DR AlphaFoldDB; Q94JS8; -.
DR SMR; Q94JS8; -.
DR KEGG; ag:AAK54279; -.
DR BioCyc; MetaCyc:MON-13547; -.
DR UniPathway; UPA00213; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR GO; GO:0010333; F:terpene synthase activity; IEA:InterPro.
DR GO; GO:0016102; P:diterpenoid biosynthetic process; IEA:InterPro.
DR CDD; cd00684; Terpene_cyclase_plant_C1; 1.
DR Gene3D; 1.10.600.10; -; 1.
DR Gene3D; 1.50.10.130; -; 1.
DR InterPro; IPR008949; Isoprenoid_synthase_dom_sf.
DR InterPro; IPR034741; Terpene_cyclase-like_1_C.
DR InterPro; IPR044814; Terpene_cyclase_plant_C1.
DR InterPro; IPR001906; Terpene_synth_N.
DR InterPro; IPR036965; Terpene_synth_N_sf.
DR InterPro; IPR005630; Terpene_synthase_metal-bd.
DR InterPro; IPR008930; Terpenoid_cyclase/PrenylTrfase.
DR Pfam; PF01397; Terpene_synth; 1.
DR Pfam; PF03936; Terpene_synth_C; 1.
DR SFLD; SFLDG01019; Terpene_Cyclase_Like_1_C_Termi; 1.
DR SUPFAM; SSF48239; SSF48239; 1.
DR SUPFAM; SSF48576; SSF48576; 1.
PE 1: Evidence at protein level;
KW Cytoplasm; Lyase; Magnesium; Manganese; Metal-binding.
FT CHAIN 1..560
FT /note="(E)-beta-farnesene synthase"
FT /id="PRO_0000402129"
FT MOTIF 312..316
FT /note="DDXXD motif"
FT BINDING 312
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250|UniProtKB:Q40577"
FT BINDING 312
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250|UniProtKB:Q40577"
FT BINDING 316
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250|UniProtKB:Q40577"
FT BINDING 316
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250|UniProtKB:Q40577"
FT BINDING 457
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250|UniProtKB:Q40577"
FT BINDING 465
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250|UniProtKB:Q40577"
SQ SEQUENCE 560 AA; 64223 MW; 89742075BBB4A317 CRC64;
MKDMSIPLLA AVSSSTEETV RPIADFHPTL WGNHFLKSAA DVETIDAATQ EQHAALKQEV
RRMITTTANK LAQKLHMIDA VQRLGVAYHF EKEIEDELGK VSHDLDSDDL YVVSLRFRLF
RQQGVKISCD VFDKFKDDEG KFKESLINDI RGMLSLYEAA YLAIRGEDIL DEAIVFTTTH
LKSVISISDH SHANSNLAEQ IRHSLQIPLR KAAARLEARY FLDIYSRDDL HDETLLKFAK
LDFNILQAAH QKEASIMTRW WNDLGFPKKV PYARDRIIET YIWMLLGVSY EPNLAFGRIF
ASKVVCMITT IDDTFDAYGT FEELTLFTEA VTRWDIGLID TLPEYMKFIV KALLDIYREA
EEELAKEGRS YGIPYAKQMM QELIILYFTE AKWLYKGYVP TFDEYKSVAL RSIGLRTLAV
ASFVDLGDFI ATKDNFECIL KNAKSLKATE TIGRLMDDIA GYKFEQKRGH NPSAVECYKN
QHGVSEEEAV KELLLEVANS WKDINEELLN PTTVPLPMLQ RLLYFARSGH FIYDDGHDRY
THSLMMKRQV ALLLTEPLAI