FARS_ZEAMM
ID FARS_ZEAMM Reviewed; 534 AA.
AC C7E5V7;
DT 30-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT 22-SEP-2009, sequence version 1.
DT 03-AUG-2022, entry version 52.
DE RecName: Full=(E)-beta-farnesene synthase;
DE EC=4.2.3.47;
DE AltName: Full=Terpene synthase 10;
OS Zea mays subsp. mexicana (Mexican teosinte).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4579;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AND CATALYTIC ACTIVITY.
RX PubMed=19646721; DOI=10.1016/j.phytochem.2009.06.011;
RA Koellner T.G., Gershenzon J., Degenhardt J.;
RT "Molecular and biochemical evolution of maize terpene synthase 10, an
RT enzyme of indirect defense.";
RL Phytochemistry 70:1139-1145(2009).
CC -!- FUNCTION: Sesquiterpene cyclase catalyzing the production of beta-
CC farnesene and alpha-bergamotene in equal amounts from farnesyl
CC diphosphate. Involved in indirect defense by producing volatile signals
CC attracting natural enemies of herbivores.
CC {ECO:0000269|PubMed:19646721}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2E,6E)-farnesyl diphosphate = (E)-beta-farnesene +
CC diphosphate; Xref=Rhea:RHEA:27425, ChEBI:CHEBI:10418,
CC ChEBI:CHEBI:33019, ChEBI:CHEBI:175763; EC=4.2.3.47;
CC Evidence={ECO:0000269|PubMed:19646721};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC Name=Co(2+); Xref=ChEBI:CHEBI:48828; Evidence={ECO:0000250};
CC Name=Mn(2+); Xref=ChEBI:CHEBI:29035; Evidence={ECO:0000250};
CC -!- PATHWAY: Secondary metabolite biosynthesis; terpenoid biosynthesis.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}.
CC -!- DOMAIN: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for
CC the catalytic activity, presumably through binding to Mg(2+).
CC -!- SIMILARITY: Belongs to the terpene synthase family. {ECO:0000305}.
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DR EMBL; GQ253104; ACT37403.1; -; mRNA.
DR AlphaFoldDB; C7E5V7; -.
DR SMR; C7E5V7; -.
DR BRENDA; 4.2.3.47; 6752.
DR UniPathway; UPA00213; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR GO; GO:0010333; F:terpene synthase activity; IEA:InterPro.
DR GO; GO:0006952; P:defense response; IEA:UniProtKB-KW.
DR GO; GO:0016102; P:diterpenoid biosynthetic process; IEA:InterPro.
DR CDD; cd00684; Terpene_cyclase_plant_C1; 1.
DR Gene3D; 1.10.600.10; -; 1.
DR Gene3D; 1.50.10.130; -; 1.
DR InterPro; IPR008949; Isoprenoid_synthase_dom_sf.
DR InterPro; IPR034741; Terpene_cyclase-like_1_C.
DR InterPro; IPR044814; Terpene_cyclase_plant_C1.
DR InterPro; IPR001906; Terpene_synth_N.
DR InterPro; IPR036965; Terpene_synth_N_sf.
DR InterPro; IPR005630; Terpene_synthase_metal-bd.
DR InterPro; IPR008930; Terpenoid_cyclase/PrenylTrfase.
DR Pfam; PF01397; Terpene_synth; 1.
DR Pfam; PF03936; Terpene_synth_C; 1.
DR SFLD; SFLDG01019; Terpene_Cyclase_Like_1_C_Termi; 1.
DR SUPFAM; SSF48239; SSF48239; 1.
DR SUPFAM; SSF48576; SSF48576; 1.
PE 1: Evidence at protein level;
KW Cytoplasm; Lyase; Magnesium; Manganese; Metal-binding; Plant defense.
FT CHAIN 1..534
FT /note="(E)-beta-farnesene synthase"
FT /id="PRO_0000402130"
FT MOTIF 287..291
FT /note="DDXXD motif"
FT BINDING 287
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250|UniProtKB:Q40577"
FT BINDING 287
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250|UniProtKB:Q40577"
FT BINDING 291
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250|UniProtKB:Q40577"
FT BINDING 291
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250|UniProtKB:Q40577"
FT BINDING 431
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250|UniProtKB:Q40577"
FT BINDING 435
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250|UniProtKB:Q40577"
FT BINDING 439
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250|UniProtKB:Q40577"
SQ SEQUENCE 534 AA; 61363 MW; 9D2FF64EA44D0DBF CRC64;
MDATAFHPSL WGDFFVKYKP PTAPKRGHMT ERAELLKEEV RKTLKAAANQ IKNALDLIIT
LQRLGLDHHY ENEISELLRF VYSSSDYDDK DLYVVSLRFY LLRKHGHCVS SDVFTSFKDE
EGNFVVDDTK CLLTLYNAAY LRTHGEKVLD EAITFTRRQL EASLLDPLEP ALLADEVSLT
LQTPLFRRLR ILEAINYIPI YGKEAGRNEA ILELAKLNFN LAQLIYCEEL KEVTLWWKQL
NVETNLSFIR DRIVECHFWM TGACCEPQYS LSRVIATKMT ALITVLDDMM DTYSTTEEAM
LLAEAIYGWE ENAAELLPGY MKDFYLYLLK TIDSCGDELG PNRSFRTFYL KEMLKVLVRG
SSQEIKWRNE NYVPKTISEH LEHSGPSVGA FQVACSSFVG MGDSITKGSF EWLLTYPELA
KSLMNIARLL NDTASTKREQ NAGHHVSTVQ CYMLMHGTTM DEACEKIKEL TEDSWKDMME
LYLTPTEHPK LIAQTIVDFA RTADYMYKET DGFTFSHTIK DMIAKLFVDP ISLF