FAU1_NATPD
ID FAU1_NATPD Reviewed; 461 AA.
AC Q3ITR7;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 08-NOV-2005, sequence version 1.
DT 25-MAY-2022, entry version 94.
DE RecName: Full=Probable ribonuclease FAU-1 {ECO:0000255|HAMAP-Rule:MF_01910};
DE EC=3.1.26.- {ECO:0000255|HAMAP-Rule:MF_01910};
DE AltName: Full=RNA-binding protein FAU-1 {ECO:0000255|HAMAP-Rule:MF_01910};
GN Name=fau-1 {ECO:0000255|HAMAP-Rule:MF_01910}; OrderedLocusNames=NP_0750A;
OS Natronomonas pharaonis (strain ATCC 35678 / DSM 2160 / CIP 103997 / JCM
OS 8858 / NBRC 14720 / NCIMB 2260 / Gabara) (Halobacterium pharaonis).
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales;
OC Haloarculaceae; Natronomonas.
OX NCBI_TaxID=348780;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 35678 / DSM 2160 / CIP 103997 / JCM 8858 / NBRC 14720 / NCIMB
RC 2260 / Gabara;
RX PubMed=16169924; DOI=10.1101/gr.3952905;
RA Falb M., Pfeiffer F., Palm P., Rodewald K., Hickmann V., Tittor J.,
RA Oesterhelt D.;
RT "Living with two extremes: conclusions from the genome sequence of
RT Natronomonas pharaonis.";
RL Genome Res. 15:1336-1343(2005).
CC -!- FUNCTION: Probable RNase involved in rRNA stability through maturation
CC and/or degradation of precursor rRNAs. Binds to RNA in loop regions
CC with AU-rich sequences. {ECO:0000255|HAMAP-Rule:MF_01910}.
CC -!- SIMILARITY: Belongs to the FAU-1 family. {ECO:0000255|HAMAP-
CC Rule:MF_01910}.
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DR EMBL; CR936257; CAI48466.1; -; Genomic_DNA.
DR RefSeq; WP_011322102.1; NC_007426.1.
DR AlphaFoldDB; Q3ITR7; -.
DR SMR; Q3ITR7; -.
DR STRING; 348780.NP_0750A; -.
DR EnsemblBacteria; CAI48466; CAI48466; NP_0750A.
DR GeneID; 3700951; -.
DR KEGG; nph:NP_0750A; -.
DR eggNOG; arCOG04307; Archaea.
DR HOGENOM; CLU_044303_0_0_2; -.
DR OMA; GTYVNVC; -.
DR OrthoDB; 83570at2157; -.
DR Proteomes; UP000002698; Chromosome.
DR GO; GO:0016891; F:endoribonuclease activity, producing 5'-phosphomonoesters; IEA:UniProtKB-UniRule.
DR GO; GO:0035925; F:mRNA 3'-UTR AU-rich region binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-UniRule.
DR Gene3D; 2.40.380.10; -; 1.
DR HAMAP; MF_01910; RNA_binding_AU_1; 1.
DR InterPro; IPR007295; DUF402.
DR InterPro; IPR035930; FomD-like_sf.
DR InterPro; IPR016730; RNA-bd_FAU-1.
DR InterPro; IPR003029; S1_domain.
DR Pfam; PF04167; DUF402; 1.
DR PIRSF; PIRSF018644; RNA-binding_FAU-1; 1.
DR SUPFAM; SSF159234; SSF159234; 1.
DR PROSITE; PS50126; S1; 1.
PE 3: Inferred from homology;
KW Endonuclease; Hydrolase; Nuclease; Reference proteome; RNA-binding;
KW rRNA processing.
FT CHAIN 1..461
FT /note="Probable ribonuclease FAU-1"
FT /id="PRO_0000334201"
FT DOMAIN 89..158
FT /note="S1 motif"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01910"
SQ SEQUENCE 461 AA; 49556 MW; CD523053114DEF3B CRC64;
MNVRVRGIYT TALTELLGGE YDIVQASPPI QRRFEASFPV AVADATVRTS DDRLGAGIAG
TADAVDAVGE TLSALGRDTF RWTDPAPRGA VFYGEVTETL GSGAVVDLGT VDGDSVEGFL
PYNRVEGYVD EGDSYRVQVA SPEPPWGDAR PSLATALRIP GGLVELRRGS EGGLSETARM
ADLLPVDPPE GWTPNWSRAA DDASLEAMEA ALRRASDRAE TVMEAVVDAD RDEPGRIVAP
QAGAWLLFGR ESRFELDEYR RQIETTMPGH HRTKAATTAA SAAVDFAEAL CEPDGAFPFD
VVTRQFGPTE GDDVTISHGK PDGRTISLGR GEVTDRDPEA ESITVEREMS GGGTYDAIGV
KREAGDIATT TFVEGRWWYP TVYCSADGER RGTYVNICTP LEVFPDTVRY VDLHVDVVKG
PDGDVRRVDD DELDAAVEAG EISEPLAERA REVAAAIKKA L