FB112_ARATH
ID FB112_ARATH Reviewed; 394 AA.
AC Q84X17; Q7XJR5; Q84X16;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 03-APR-2007, sequence version 2.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=F-box protein At2g17830;
GN OrderedLocusNames=At2g17830; ORFNames=T13L16.15;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
RC STRAIN=cv. Columbia;
RX PubMed=16244158; DOI=10.1104/pp.105.063479;
RA Xiao Y.-L., Smith S.R., Ishmael N., Redman J.C., Kumar N., Monaghan E.L.,
RA Ayele M., Haas B.J., Wu H.C., Town C.D.;
RT "Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2
RT reveals numerous transcript variants.";
RL Plant Physiol. 139:1323-1337(2005).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q84X17-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q84X17-2; Sequence=VSP_024317, VSP_035467;
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP002685; AEC06692.1; -; Genomic_DNA.
DR EMBL; AY219091; AAO37178.1; -; mRNA.
DR EMBL; AY219092; AAO37179.1; -; mRNA.
DR PIR; T00841; T00841.
DR RefSeq; NP_179373.2; NM_127336.3. [Q84X17-1]
DR AlphaFoldDB; Q84X17; -.
DR PaxDb; Q84X17; -.
DR PRIDE; Q84X17; -.
DR ProteomicsDB; 222544; -. [Q84X17-1]
DR EnsemblPlants; AT2G17830.1; AT2G17830.1; AT2G17830. [Q84X17-1]
DR GeneID; 816292; -.
DR Gramene; AT2G17830.1; AT2G17830.1; AT2G17830. [Q84X17-1]
DR KEGG; ath:AT2G17830; -.
DR Araport; AT2G17830; -.
DR TAIR; locus:2827846; AT2G17830.
DR HOGENOM; CLU_034692_0_0_1; -.
DR InParanoid; Q84X17; -.
DR OMA; ARICEFE; -.
DR PhylomeDB; Q84X17; -.
DR PRO; PR:Q84X17; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q84X17; baseline and differential.
DR Genevisible; Q84X17; AT.
DR InterPro; IPR006527; F-box-assoc_dom_typ1.
DR InterPro; IPR017451; F-box-assoc_interact_dom.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR011043; Gal_Oxase/kelch_b-propeller.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF07734; FBA_1; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF50965; SSF50965; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR TIGRFAMs; TIGR01640; F_box_assoc_1; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..394
FT /note="F-box protein At2g17830"
FT /id="PRO_0000283383"
FT DOMAIN 1..47
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT VAR_SEQ 90..105
FT /note="GTLTSFSDDANQHQVD -> VLEKNSLRCCFRVMLH (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:16244158"
FT /id="VSP_024317"
FT VAR_SEQ 106..394
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:16244158"
FT /id="VSP_035467"
SQ SEQUENCE 394 AA; 46014 MW; 0795274270FE2ABA CRC64;
MAIMSDLPRD LLAEILSRVP LASLRSVRFT CKKWNDLSKD RSFLKKQIVE AKKKQLKSKE
FEVIMMRNFR VYLTSVDLHN DVNPSFTPKG TLTSFSDDAN QHQVDNVSSV FHCDGLLLCI
TKDLNFRLVV WNPYFGQTRW IQPRNSYHIK DIYAIGYDEN KNHKILRLKD QYYDYDSHPR
ARICEFELYS FESNSWKVVL DVSPDWYIHS YHRGLSVKGN TYWYATEKHG YVNFLICFDF
TTEKFGPRLP LPFNATESFT YDDVVTLSSV GEEQLALLFQ SDATLMMEIW VTSKVDPTEV
LWNKLFLAVD HDMIEFDYEL KFVADAGSFF IDQKKNVVVV FDKDMNEHTH RGMAYIVGKN
GYFKRVDIGE EAYTSCFPLV CSYVPSSVQI RQLT