FB130_ARATH
ID FB130_ARATH Reviewed; 449 AA.
AC Q3EBI7; O22205; Q84WY7; Q84WY8;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 08-NOV-2005, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=F-box protein At2g40910;
GN OrderedLocusNames=At2g40910; ORFNames=T20B5.11;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
RC STRAIN=cv. Columbia;
RX PubMed=16244158; DOI=10.1104/pp.105.063479;
RA Xiao Y.-L., Smith S.R., Ishmael N., Redman J.C., Kumar N., Monaghan E.L.,
RA Ayele M., Haas B.J., Wu H.C., Town C.D.;
RT "Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2
RT reveals numerous transcript variants.";
RL Plant Physiol. 139:1323-1337(2005).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q3EBI7-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q3EBI7-2; Sequence=VSP_024318;
CC -!- SEQUENCE CAUTION:
CC Sequence=AAB86451.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AAO37210.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; AC002409; AAB86451.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002685; AEC09895.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC09896.1; -; Genomic_DNA.
DR EMBL; AY219123; AAO37210.1; ALT_FRAME; mRNA.
DR EMBL; AY219124; AAO37211.1; -; mRNA.
DR PIR; T00755; T00755.
DR RefSeq; NP_181623.2; NM_129654.3. [Q3EBI7-1]
DR RefSeq; NP_973653.1; NM_201924.1. [Q3EBI7-2]
DR AlphaFoldDB; Q3EBI7; -.
DR STRING; 3702.AT2G40910.1; -.
DR PaxDb; Q3EBI7; -.
DR PRIDE; Q3EBI7; -.
DR EnsemblPlants; AT2G40910.1; AT2G40910.1; AT2G40910. [Q3EBI7-1]
DR EnsemblPlants; AT2G40910.2; AT2G40910.2; AT2G40910. [Q3EBI7-2]
DR GeneID; 818688; -.
DR Gramene; AT2G40910.1; AT2G40910.1; AT2G40910. [Q3EBI7-1]
DR Gramene; AT2G40910.2; AT2G40910.2; AT2G40910. [Q3EBI7-2]
DR KEGG; ath:AT2G40910; -.
DR Araport; AT2G40910; -.
DR TAIR; locus:2058470; AT2G40910.
DR eggNOG; ENOG502SPBF; Eukaryota.
DR HOGENOM; CLU_027176_8_2_1; -.
DR InParanoid; Q3EBI7; -.
DR OMA; WAELIEY; -.
DR OrthoDB; 731539at2759; -.
DR PhylomeDB; Q3EBI7; -.
DR PRO; PR:Q3EBI7; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q3EBI7; baseline and differential.
DR Genevisible; Q3EBI7; AT.
DR InterPro; IPR013187; F-box-assoc_dom_typ3.
DR InterPro; IPR017451; F-box-assoc_interact_dom.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08268; FBA_3; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR TIGRFAMs; TIGR01640; F_box_assoc_1; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..449
FT /note="F-box protein At2g40910"
FT /id="PRO_0000283401"
FT DOMAIN 63..113
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VAR_SEQ 1..35
FT /note="MKRRRRDLKQAAESEQEECQSVPQVVSLRDSDQLQ -> MSERSPGRLSQRF
FT RSTSVSNCCFVVSLK (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:16244158"
FT /id="VSP_024318"
FT CONFLICT 194
FT /note="I -> T (in Ref. 3; AAO37211)"
FT /evidence="ECO:0000305"
FT CONFLICT 213
FT /note="G -> E (in Ref. 3; AAO37211)"
FT /evidence="ECO:0000305"
FT CONFLICT 394
FT /note="P -> L (in Ref. 3; AAO37210/AAO37211)"
FT /evidence="ECO:0000305"
FT CONFLICT Q3EBI7-2:16
FT /note="T -> A (in Ref. 3; AAO37211)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 449 AA; 51309 MW; C373DDBE3FDB0276 CRC64;
MKRRRRDLKQ AAESEQEECQ SVPQVVSLRD SDQLQIMDEK GDNSLALLPA KLPMRMCSTR
ERRKYTCEIP PDLLMEIVMR LPAKSMVRFK CISKQWSSLI SCRYFCNSLF TSVTRKKQPH
IHMCLVDHGG QRVLLSLSST SPDNTCYVVD QDLSLTGMGG FFLNLVRGLL CFSVREKACI
YNPTTRQRLT LPAIKSDIIA LKDERKDIRY YIGHDPVNDQ YKLVCTIGIS SAFFTNLKSE
HWVFVLEAGG SWRKVRTLES YHPHAPSTVG QFINGSVVYY MAWLDMDTCA VVSFDITSEE
LTTIIVTLEA GDVALPAGRM KAGLIQYHGE IAVFDHTHLK EKFLVDLWVL KDAGMKKWSK
KRLVLQPCQK HLVHDDIELV VKGTTQDGKV ILAPVNMCSQ LYILCYDMGS NDLRKVEIKG
VPDIWFDKEC YFDLKYSLDE SEDVIYLET
