FB254_ARATH
ID FB254_ARATH Reviewed; 476 AA.
AC Q8VYT5; Q9FLR4;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2002, sequence version 1.
DT 25-MAY-2022, entry version 111.
DE RecName: Full=F-box protein At5g07670;
GN OrderedLocusNames=At5g07670; ORFNames=MBK20.11;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9628582; DOI=10.1093/dnares/5.1.41;
RA Sato S., Kaneko T., Kotani H., Nakamura Y., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. IV. Sequence
RT features of the regions of 1,456,315 bp covered by nineteen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:41-54(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB11445.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB010070; BAB11445.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED91191.1; -; Genomic_DNA.
DR EMBL; AY070039; AAL49796.1; -; mRNA.
DR EMBL; AY096547; AAM20197.1; -; mRNA.
DR RefSeq; NP_196384.2; NM_120849.4.
DR AlphaFoldDB; Q8VYT5; -.
DR SMR; Q8VYT5; -.
DR STRING; 3702.AT5G07670.1; -.
DR iPTMnet; Q8VYT5; -.
DR PaxDb; Q8VYT5; -.
DR PRIDE; Q8VYT5; -.
DR ProteomicsDB; 222403; -.
DR EnsemblPlants; AT5G07670.1; AT5G07670.1; AT5G07670.
DR GeneID; 830660; -.
DR Gramene; AT5G07670.1; AT5G07670.1; AT5G07670.
DR KEGG; ath:AT5G07670; -.
DR Araport; AT5G07670; -.
DR TAIR; locus:2160314; AT5G07670.
DR eggNOG; KOG1947; Eukaryota.
DR HOGENOM; CLU_039683_0_0_1; -.
DR InParanoid; Q8VYT5; -.
DR OMA; CEENMLP; -.
DR OrthoDB; 1333044at2759; -.
DR PhylomeDB; Q8VYT5; -.
DR PRO; PR:Q8VYT5; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q8VYT5; baseline and differential.
DR GO; GO:0019005; C:SCF ubiquitin ligase complex; IBA:GO_Central.
DR GO; GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR032675; LRR_dom_sf.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..476
FT /note="F-box protein At5g07670"
FT /id="PRO_0000283521"
FT DOMAIN 59..111
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
SQ SEQUENCE 476 AA; 52993 MW; E152E22856864E12 CRC64;
MSYNTGKESS PVSPLKKRRA SWSELWVNHH HLLSSSPLDL AAKFQSLTPP ISKSKTLLPD
FTLLLPDLIL IRVIQKIPNS QRKNLSLVCK RWFRLHGRLV RSFKVSDWEF LSSGRLISRF
PNLETVDLVS GCLISPPNLG ILVNHRIVSF TVGVGSYQSW SFFEENLLSV ELVERGLKAL
AGGCSNLRKL VVTNTSELGL LNVAEECSRL QELELHKCSD SVLLGIGAFE NLQILRLVGN
VDGLYNSLVS DIGLMILAQG CKRLVKLELV GCEGGFDGIK EIGECCQMLE ELTVCDNKME
SGWLGGLRYC ENLKTLKLVS CKKIDNDPDE SLSCCCPALE RLQLEKCQLR DKNTVKALFK
MCEAAREIVF QDCWGLDNDI FSLAMAFGRV KLLYLEGCSL LTTSGLESVI LHWHELEHLK
VVSCKNIKDS EVSPSLSALF SALVELQWRP DTRSHLSSSL TGTGIGEKGG KFFKKT