FB270_ARATH
ID FB270_ARATH Reviewed; 252 AA.
AC Q9FL82;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 111.
DE RecName: Full=F-box protein At5g39250;
GN OrderedLocusNames=At5g39250; ORFNames=K3K3.16;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9679202; DOI=10.1093/dnares/5.2.131;
RA Kaneko T., Kotani H., Nakamura Y., Sato S., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence
RT features of the regions of 1,381,565 bp covered by twenty one physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:131-145(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
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DR EMBL; AB010694; BAB09380.1; -; Genomic_DNA.
DR EMBL; CP002688; AED94412.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM70439.1; -; Genomic_DNA.
DR EMBL; AY091074; AAM13894.1; -; mRNA.
DR EMBL; AY122944; AAM67477.1; -; mRNA.
DR RefSeq; NP_001332049.1; NM_001344286.1.
DR RefSeq; NP_198741.1; NM_123287.4.
DR AlphaFoldDB; Q9FL82; -.
DR SMR; Q9FL82; -.
DR BioGRID; 19172; 9.
DR IntAct; Q9FL82; 3.
DR STRING; 3702.AT5G39250.1; -.
DR PaxDb; Q9FL82; -.
DR PRIDE; Q9FL82; -.
DR ProteomicsDB; 230707; -.
DR DNASU; 833921; -.
DR EnsemblPlants; AT5G39250.1; AT5G39250.1; AT5G39250.
DR EnsemblPlants; AT5G39250.2; AT5G39250.2; AT5G39250.
DR GeneID; 833921; -.
DR Gramene; AT5G39250.1; AT5G39250.1; AT5G39250.
DR Gramene; AT5G39250.2; AT5G39250.2; AT5G39250.
DR KEGG; ath:AT5G39250; -.
DR Araport; AT5G39250; -.
DR TAIR; locus:2157205; AT5G39250.
DR eggNOG; ENOG502QRXG; Eukaryota.
DR HOGENOM; CLU_075668_0_0_1; -.
DR InParanoid; Q9FL82; -.
DR OMA; ARDDFFW; -.
DR OrthoDB; 1187522at2759; -.
DR PhylomeDB; Q9FL82; -.
DR PRO; PR:Q9FL82; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FL82; baseline and differential.
DR Genevisible; Q9FL82; AT.
DR InterPro; IPR044207; At5g39250-like.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR PANTHER; PTHR47722; PTHR47722; 1.
DR Pfam; PF12937; F-box-like; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..252
FT /note="F-box protein At5g39250"
FT /id="PRO_0000283536"
FT DOMAIN 1..42
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
SQ SEQUENCE 252 AA; 29300 MW; 2F09FA32C35757A7 CRC64;
MFSEEVLKNV FPLLEGEDLA SCMGVCKQWR DIARDDFYWK CQCAKKWPSV CKRHKPPTET
YYKMYQTFSK RRLNRALPPP RLSFENLEFF IDIWSEERLV FSGLIPGVAL ENGIETLPLG
ISNVLRTHLG RPDYKMVVPA EPRFTIPLNQ SVSVSVLVAR NDSDKVARII NRSVFDYIDR
SSYRALAFEY LDLSPCYPFI SGIRAWISLL FMDVEDMNDD GLLDVFGIQL DFNDVADTKE
EVLWLLDMLD WK