FB281_ARATH
ID FB281_ARATH Reviewed; 388 AA.
AC Q9FIH1; Q84TD9;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 31-MAY-2011, sequence version 2.
DT 03-AUG-2022, entry version 97.
DE RecName: Full=F-box protein At5g42460;
GN OrderedLocusNames=At5g42460; ORFNames=MDH9.16;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10048488; DOI=10.1093/dnares/5.6.379;
RA Asamizu E., Sato S., Kaneko T., Nakamura Y., Kotani H., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VIII. Sequence
RT features of the regions of 1,081,958 bp covered by seventeen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:379-391(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 9-388.
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 65-388.
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB10487.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC Sequence=BAE99466.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AB016888; BAB10487.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002688; AED94813.1; -; Genomic_DNA.
DR EMBL; AK227463; BAE99466.1; ALT_INIT; mRNA.
DR EMBL; BT005881; AAO64816.1; -; mRNA.
DR RefSeq; NP_199061.3; NM_123611.6.
DR AlphaFoldDB; Q9FIH1; -.
DR PaxDb; Q9FIH1; -.
DR PRIDE; Q9FIH1; -.
DR ProteomicsDB; 230998; -.
DR EnsemblPlants; AT5G42460.1; AT5G42460.1; AT5G42460.
DR GeneID; 834253; -.
DR Gramene; AT5G42460.1; AT5G42460.1; AT5G42460.
DR KEGG; ath:AT5G42460; -.
DR Araport; AT5G42460; -.
DR TAIR; locus:2162321; AT5G42460.
DR HOGENOM; CLU_034692_0_0_1; -.
DR InParanoid; Q9FIH1; -.
DR OMA; HHQVDNV; -.
DR OrthoDB; 634455at2759; -.
DR PRO; PR:Q9FIH1; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FIH1; baseline and differential.
DR Genevisible; Q9FIH1; AT.
DR InterPro; IPR006527; F-box-assoc_dom_typ1.
DR InterPro; IPR017451; F-box-assoc_interact_dom.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR011043; Gal_Oxase/kelch_b-propeller.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF07734; FBA_1; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF50965; SSF50965; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR TIGRFAMs; TIGR01640; F_box_assoc_1; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..388
FT /note="F-box protein At5g42460"
FT /id="PRO_0000283547"
FT DOMAIN 1..47
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
SQ SEQUENCE 388 AA; 45311 MW; 54B9019FC2173C72 CRC64;
MTIMSDLPRD LLAEILSRVP LTSLRAVRLT CKKWNDLSKD RSFLKKQIVE TKKKQLESKE
IEVIMMRNFR VYLTSIDIHN NVDPSFTPKG TLISLSDDAN HHQVDNVSRV FHCDGLLLCI
TKDLHYRLVV WNPYFGQTRW IQPRNSYHRK DNYALGYDEK KNHKILRLKD NYYAPRERIC
EFELYSFESN SWKVVLDVSP DWYIPSYNRG LSLKGNTYWY ATEKHVNVDF LICFDFTTEK
FGPRLPLPFN ATESPTYEDV VTLSSVGEEQ LAVLFQSEYT LMMEIWVTSK VESTEVLWNK
LFLEVDLIAI SSHFQFLAEA GSFFIDQKKN VVVVFDKDMD EATDRDMAYV VGKNGYFKKV
DIGEEAYTSC FPLVCSYVPS SEQIRQLT