位置:首页 > 蛋白库 > FB281_ARATH
FB281_ARATH
ID   FB281_ARATH             Reviewed;         388 AA.
AC   Q9FIH1; Q84TD9;
DT   03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT   31-MAY-2011, sequence version 2.
DT   03-AUG-2022, entry version 97.
DE   RecName: Full=F-box protein At5g42460;
GN   OrderedLocusNames=At5g42460; ORFNames=MDH9.16;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10048488; DOI=10.1093/dnares/5.6.379;
RA   Asamizu E., Sato S., Kaneko T., Nakamura Y., Kotani H., Miyajima N.,
RA   Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. VIII. Sequence
RT   features of the regions of 1,081,958 bp covered by seventeen physically
RT   assigned P1 and TAC clones.";
RL   DNA Res. 5:379-391(1998).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 9-388.
RC   STRAIN=cv. Columbia;
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA   Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA   Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA   Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA   Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL   Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 65-388.
RC   STRAIN=cv. Columbia;
RX   PubMed=14593172; DOI=10.1126/science.1088305;
RA   Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA   Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA   Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA   Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA   Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA   Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA   Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA   Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA   Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA   Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA   Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA   Ecker J.R.;
RT   "Empirical analysis of transcriptional activity in the Arabidopsis
RT   genome.";
RL   Science 302:842-846(2003).
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAB10487.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC       Sequence=BAE99466.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AB016888; BAB10487.1; ALT_INIT; Genomic_DNA.
DR   EMBL; CP002688; AED94813.1; -; Genomic_DNA.
DR   EMBL; AK227463; BAE99466.1; ALT_INIT; mRNA.
DR   EMBL; BT005881; AAO64816.1; -; mRNA.
DR   RefSeq; NP_199061.3; NM_123611.6.
DR   AlphaFoldDB; Q9FIH1; -.
DR   PaxDb; Q9FIH1; -.
DR   PRIDE; Q9FIH1; -.
DR   ProteomicsDB; 230998; -.
DR   EnsemblPlants; AT5G42460.1; AT5G42460.1; AT5G42460.
DR   GeneID; 834253; -.
DR   Gramene; AT5G42460.1; AT5G42460.1; AT5G42460.
DR   KEGG; ath:AT5G42460; -.
DR   Araport; AT5G42460; -.
DR   TAIR; locus:2162321; AT5G42460.
DR   HOGENOM; CLU_034692_0_0_1; -.
DR   InParanoid; Q9FIH1; -.
DR   OMA; HHQVDNV; -.
DR   OrthoDB; 634455at2759; -.
DR   PRO; PR:Q9FIH1; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q9FIH1; baseline and differential.
DR   Genevisible; Q9FIH1; AT.
DR   InterPro; IPR006527; F-box-assoc_dom_typ1.
DR   InterPro; IPR017451; F-box-assoc_interact_dom.
DR   InterPro; IPR036047; F-box-like_dom_sf.
DR   InterPro; IPR001810; F-box_dom.
DR   InterPro; IPR011043; Gal_Oxase/kelch_b-propeller.
DR   Pfam; PF00646; F-box; 1.
DR   Pfam; PF07734; FBA_1; 1.
DR   SMART; SM00256; FBOX; 1.
DR   SUPFAM; SSF50965; SSF50965; 1.
DR   SUPFAM; SSF81383; SSF81383; 1.
DR   TIGRFAMs; TIGR01640; F_box_assoc_1; 1.
DR   PROSITE; PS50181; FBOX; 1.
PE   2: Evidence at transcript level;
KW   Reference proteome.
FT   CHAIN           1..388
FT                   /note="F-box protein At5g42460"
FT                   /id="PRO_0000283547"
FT   DOMAIN          1..47
FT                   /note="F-box"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
SQ   SEQUENCE   388 AA;  45311 MW;  54B9019FC2173C72 CRC64;
     MTIMSDLPRD LLAEILSRVP LTSLRAVRLT CKKWNDLSKD RSFLKKQIVE TKKKQLESKE
     IEVIMMRNFR VYLTSIDIHN NVDPSFTPKG TLISLSDDAN HHQVDNVSRV FHCDGLLLCI
     TKDLHYRLVV WNPYFGQTRW IQPRNSYHRK DNYALGYDEK KNHKILRLKD NYYAPRERIC
     EFELYSFESN SWKVVLDVSP DWYIPSYNRG LSLKGNTYWY ATEKHVNVDF LICFDFTTEK
     FGPRLPLPFN ATESPTYEDV VTLSSVGEEQ LAVLFQSEYT LMMEIWVTSK VESTEVLWNK
     LFLEVDLIAI SSHFQFLAEA GSFFIDQKKN VVVVFDKDMD EATDRDMAYV VGKNGYFKKV
     DIGEEAYTSC FPLVCSYVPS SEQIRQLT
 
 
维奥蛋白资源库 - 中文蛋白资源 CopyRight © 2010-2024