FB286_ARATH
ID FB286_ARATH Reviewed; 287 AA.
AC Q1PDL6; Q9FJL5;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 16-MAY-2006, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=F-box protein At5g48550;
GN OrderedLocusNames=At5g48550; ORFNames=K15N18.1;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9872454; DOI=10.1093/dnares/5.5.297;
RA Nakamura Y., Sato S., Asamizu E., Kaneko T., Kotani H., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VII. Sequence
RT features of the regions of 1,013,767 bp covered by sixteen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:297-308(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q1PDL6-1; Sequence=Displayed;
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB10688.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB015468; BAB10688.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED95687.1; -; Genomic_DNA.
DR EMBL; DQ447052; ABE66231.1; -; mRNA.
DR RefSeq; NP_001190491.1; NM_001203562.2. [Q1PDL6-1]
DR RefSeq; NP_199666.1; NM_124231.1.
DR AlphaFoldDB; Q1PDL6; -.
DR PaxDb; Q1PDL6; -.
DR PRIDE; Q1PDL6; -.
DR EnsemblPlants; AT5G48550.2; AT5G48550.2; AT5G48550. [Q1PDL6-1]
DR GeneID; 834911; -.
DR Gramene; AT5G48550.2; AT5G48550.2; AT5G48550. [Q1PDL6-1]
DR KEGG; ath:AT5G48550; -.
DR Araport; AT5G48550; -.
DR HOGENOM; CLU_970915_0_0_1; -.
DR OrthoDB; 1647911at2759; -.
DR PhylomeDB; Q1PDL6; -.
DR PRO; PR:Q1PDL6; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q1PDL6; baseline and differential.
DR Genevisible; Q1PDL6; AT.
DR InterPro; IPR017451; F-box-assoc_interact_dom.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR Pfam; PF00646; F-box; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR TIGRFAMs; TIGR01640; F_box_assoc_1; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..287
FT /note="F-box protein At5g48550"
FT /id="PRO_0000283552"
FT DOMAIN 1..36
FT /note="F-box"
SQ SEQUENCE 287 AA; 32413 MW; 20991F6AD9BA6F7F CRC64;
MILRKLPGKQ ALICRCVSKT FLSVLDSPCF MERHLRDDHD DGEPPALLTY GVHDVAVFYK
LWMCKTMLEE SDEAKVLKVD DRHLWNYPCI ETQSYFHPIS SGGLILTRCN SNSPFVFNPI
RKEVMKIPAQ GDENAWKQPL GFGYDPKGNT HKIISVWETQ EHVLVAEIFS LGDTDTKWRS
LDISSSASAL PFGHVSFSSS TVTIGGYVYW TATISEGSQG ACTCGCRSAE TGYRLETKNW
TKHMVLYRRH LSGFLTQLSS RGLSSNSSAS LIFEGPWQWW IFLPRSV