FB328_ARATH
ID FB328_ARATH Reviewed; 233 AA.
AC Q9LXX3;
DT 10-AUG-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 83.
DE RecName: Full=Probable F-box protein At3g56670;
GN OrderedLocusNames=At3g56670; ORFNames=T5P19.320;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC STRAIN=cv. Columbia;
RX PubMed=16244158; DOI=10.1104/pp.105.063479;
RA Xiao Y.-L., Smith S.R., Ishmael N., Redman J.C., Kumar N., Monaghan E.L.,
RA Ayele M., Haas B.J., Wu H.C., Town C.D.;
RT "Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2
RT reveals numerous transcript variants.";
RL Plant Physiol. 139:1323-1337(2005).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q9LXX3-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q9LXX3-2; Sequence=VSP_039572;
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DR EMBL; AL163972; CAB88070.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE79550.1; -; Genomic_DNA.
DR EMBL; EG492417; -; NOT_ANNOTATED_CDS; mRNA.
DR PIR; T49068; T49068.
DR RefSeq; NP_191226.1; NM_115526.1. [Q9LXX3-1]
DR AlphaFoldDB; Q9LXX3; -.
DR PaxDb; Q9LXX3; -.
DR PRIDE; Q9LXX3; -.
DR EnsemblPlants; AT3G56670.1; AT3G56670.1; AT3G56670. [Q9LXX3-1]
DR GeneID; 824834; -.
DR Gramene; AT3G56670.1; AT3G56670.1; AT3G56670. [Q9LXX3-1]
DR KEGG; ath:AT3G56670; -.
DR Araport; AT3G56670; -.
DR TAIR; locus:2102584; AT3G56670.
DR HOGENOM; CLU_1191304_0_0_1; -.
DR InParanoid; Q9LXX3; -.
DR OMA; GPYVECF; -.
DR PhylomeDB; Q9LXX3; -.
DR PRO; PR:Q9LXX3; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LXX3; differential.
DR Genevisible; Q9LXX3; AT.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..233
FT /note="Probable F-box protein At3g56670"
FT /id="PRO_0000396043"
FT DOMAIN 22..69
FT /note="F-box"
FT VAR_SEQ 1..134
FT /note="MMTRGRKENSNETSPSPTLLLHGGVIDIPLNTDSGVTKNTPGEIALLRFKSV
FT SKLWSSIISSRRDFIESIVTRFLTQPPHDAHFIFGFDSGPYVECFLGLSSTYPPNTDIE
FT AVLSIPGRMAQYVYGLMCCLSGF -> MEYIWVM (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:16244158"
FT /id="VSP_039572"
FT CONFLICT 178
FT /note="I -> V (in Ref. 3; EG492417)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 233 AA; 26708 MW; 213786993E0E66A5 CRC64;
MMTRGRKENS NETSPSPTLL LHGGVIDIPL NTDSGVTKNT PGEIALLRFK SVSKLWSSII
SSRRDFIESI VTRFLTQPPH DAHFIFGFDS GPYVECFLGL SSTYPPNTDI EAVLSIPGRM
AQYVYGLMCC LSGFKDAKKE TQGWSRIFFH EMHGFSNWRI LGATCGGEIL FAKWMYCIYH
YEDKLLCVLY YEPKRNSMRG VDVEGTLPND TRRYRFVIIW TIPDHVQNTM YLY
