FB39_ARATH
ID FB39_ARATH Reviewed; 459 AA.
AC Q0V7S0; Q84WE5; Q9FX05;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 03-AUG-2022, entry version 83.
DE RecName: Full=F-box protein At1g47340;
GN OrderedLocusNames=At1g47340; ORFNames=T3F24.5;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Quinitio C., Chen H., Kim C.J., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 3-459.
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- SEQUENCE CAUTION:
CC Sequence=AAG11425.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AAO41958.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC015449; AAG11425.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE32158.1; -; Genomic_DNA.
DR EMBL; BT026500; ABH04607.1; -; mRNA.
DR EMBL; BT003911; AAO41958.1; ALT_INIT; mRNA.
DR PIR; B96514; B96514.
DR RefSeq; NP_001323147.1; NM_001333271.1.
DR RefSeq; NP_001323148.1; NM_001333272.1.
DR RefSeq; NP_175167.2; NM_103628.5.
DR AlphaFoldDB; Q0V7S0; -.
DR SMR; Q0V7S0; -.
DR BioGRID; 26362; 11.
DR STRING; 3702.AT1G47340.1; -.
DR iPTMnet; Q0V7S0; -.
DR PaxDb; Q0V7S0; -.
DR PRIDE; Q0V7S0; -.
DR ProteomicsDB; 230813; -.
DR EnsemblPlants; AT1G47340.1; AT1G47340.1; AT1G47340.
DR GeneID; 841137; -.
DR Gramene; AT1G47340.1; AT1G47340.1; AT1G47340.
DR KEGG; ath:AT1G47340; -.
DR Araport; AT1G47340; -.
DR TAIR; locus:2203736; AT1G47340.
DR eggNOG; ENOG502S9E8; Eukaryota.
DR HOGENOM; CLU_027176_8_1_1; -.
DR InParanoid; Q0V7S0; -.
DR OrthoDB; 731539at2759; -.
DR PhylomeDB; Q0V7S0; -.
DR PRO; PR:Q0V7S0; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q0V7S0; baseline and differential.
DR Genevisible; Q0V7S0; AT.
DR InterPro; IPR013187; F-box-assoc_dom_typ3.
DR InterPro; IPR017451; F-box-assoc_interact_dom.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08268; FBA_3; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR TIGRFAMs; TIGR01640; F_box_assoc_1; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..459
FT /note="F-box protein At1g47340"
FT /id="PRO_0000283315"
FT DOMAIN 31..76
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT REGION 434..459
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 436..459
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 459 AA; 53454 MW; 2306A39D2373FDF4 CRC64;
MLKKTAPNSP KRRRCSSFAA VDLVGSANRT FMVSVSLPKE LILEILKRLP AKSVKRFHCV
SKQWASMLSC PHFRELFLTR SSSAQPRLLF AIEKHNQWSL FSLPQRLTPY EKSSSSSVVV
TPEFHMKFPP DGMLIYPRHD RRFSFGYASG LMYFYGMWIN EHDYDGVPVI CNPLTGRYAS
LPFLERYRKA FSFFGFDPIE KQYKVLFMAY PSGPDHHTVL TFGTGEMSWR KIECSVKHDI
VSDGICINGV MYYLGDTSEF MTAFVVVCFD VRSETFSFIY PGSYCEVINY KGKLGLVFCD
DYTDDAIELR LWVLEDKEKI EWSKYAYKLK DEKFSAHYVS IVGVSAAGEI VLSMADFTSK
QPFYVFYYNP ERNTLQCTEI QGFEEHHGTF DRRSRVRVFV DDCSSFYRFA DHVEYLNVDE
PKLLKSKIYD GPNAKIEWEE EEEEDEDEDQ EKEEEDQWS
