FB48_ARATH
ID FB48_ARATH Reviewed; 365 AA.
AC Q9LNF6; F4HWR9; Q1PFM4; Q9C7Z4;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 31-MAY-2011, sequence version 3.
DT 25-MAY-2022, entry version 106.
DE RecName: Full=F-box protein At1g48060;
GN OrderedLocusNames=At1g48060; ORFNames=F21D18.25, T2J15.3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 13-244.
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
CC -!- CAUTION: It is uncertain whether Met-1 or Met-13 is the initiator.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF79533.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AAG51533.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC023673; AAF79533.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AC051631; AAG51533.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; DQ446339; ABE65700.1; -; mRNA.
DR AlphaFoldDB; Q9LNF6; -.
DR PaxDb; Q9LNF6; -.
DR PRIDE; Q9LNF6; -.
DR EnsemblPlants; AT1G48060.1; AT1G48060.1; AT1G48060.
DR Gramene; AT1G48060.1; AT1G48060.1; AT1G48060.
DR Araport; AT1G48060; -.
DR HOGENOM; CLU_027176_8_0_1; -.
DR InParanoid; Q9LNF6; -.
DR OrthoDB; 731539at2759; -.
DR PRO; PR:Q9LNF6; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9LNF6; baseline and differential.
DR Genevisible; Q9LNF6; AT.
DR InterPro; IPR013187; F-box-assoc_dom_typ3.
DR InterPro; IPR017451; F-box-assoc_interact_dom.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08268; FBA_3; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR TIGRFAMs; TIGR01640; F_box_assoc_1; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..365
FT /note="F-box protein At1g48060"
FT /id="PRO_0000283322"
FT DOMAIN 20..69
FT /note="F-box"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..16
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 365 AA; 42266 MW; FB0C3815A783CA29 CRC64;
MKPQEEEEKN ENMARKRSKS SSSLSIPLDI ATDIFLRLPA KSVVRFSCVA KHWSSITTAP
YFTNSFETRP NLLFFFKEAD RFFVVTVPKP NRRPNESVSH TSSQILDSYQ TPYPKHSCFT
IKTESVHGLI CFQRGTKPIV WNPTMRKFKP LRKPDKSWES LTVFLGYDPL ERTHKVVAMP
CDKASDECRI LTLGSADQES WRTVKTNYKH HPSRGNRKNN YGPCRCINGV LYYLAEIDRH
RLIGKFAFLG HSNVKNSLPM WVLEGEKKGE WSTYNFLPLS HYDRRLEFHF KLIGITNDGE
LIYVPNTVFK TFEVIYIDPI RKTFSLVKYE GVADKGFRQR NGLGEDKPLR GIQYSPNHVE
TLLSL