FB4_ARATH
ID FB4_ARATH Reviewed; 312 AA.
AC Q7X7A9; Q3E7H5;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=F-box protein At1g11270;
GN OrderedLocusNames=At1g11270; ORFNames=T28P6.23;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q7X7A9-1; Sequence=Displayed;
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DR EMBL; AC007259; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002684; AEE28706.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE28707.1; -; Genomic_DNA.
DR EMBL; BT008547; AAP40374.1; -; mRNA.
DR EMBL; BT008643; AAP40458.1; -; mRNA.
DR EMBL; AK229702; BAF01541.1; -; mRNA.
DR RefSeq; NP_172594.1; NM_101000.5. [Q7X7A9-1]
DR RefSeq; NP_973810.1; NM_202081.2. [Q7X7A9-1]
DR AlphaFoldDB; Q7X7A9; -.
DR BioGRID; 22909; 2.
DR IntAct; Q7X7A9; 1.
DR STRING; 3702.AT1G11270.2; -.
DR PaxDb; Q7X7A9; -.
DR PRIDE; Q7X7A9; -.
DR EnsemblPlants; AT1G11270.1; AT1G11270.1; AT1G11270. [Q7X7A9-1]
DR EnsemblPlants; AT1G11270.2; AT1G11270.2; AT1G11270. [Q7X7A9-1]
DR GeneID; 837669; -.
DR Gramene; AT1G11270.1; AT1G11270.1; AT1G11270. [Q7X7A9-1]
DR Gramene; AT1G11270.2; AT1G11270.2; AT1G11270. [Q7X7A9-1]
DR KEGG; ath:AT1G11270; -.
DR Araport; AT1G11270; -.
DR TAIR; locus:2202099; AT1G11270.
DR HOGENOM; CLU_027176_4_0_1; -.
DR InParanoid; Q7X7A9; -.
DR OMA; YRINDYQ; -.
DR OrthoDB; 634455at2759; -.
DR PhylomeDB; Q7X7A9; -.
DR PRO; PR:Q7X7A9; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q7X7A9; baseline and differential.
DR Genevisible; Q7X7A9; AT.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0010286; P:heat acclimation; IEP:TAIR.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR InterPro; IPR006527; F-box-assoc_dom_typ1.
DR InterPro; IPR017451; F-box-assoc_interact_dom.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF07734; FBA_1; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR TIGRFAMs; TIGR01640; F_box_assoc_1; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..312
FT /note="F-box protein At1g11270"
FT /id="PRO_0000283283"
FT DOMAIN 29..80
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
SQ SEQUENCE 312 AA; 35682 MW; 90AFC033CC45C823 CRC64;
MLKRDCSSVV GSERERDGSS LALKRHCSSV VKLLLPHDVV GLILERLPVE SLLRFKCVSN
QWKSTIESQC FQERQLIRRM ESRGPDVLVV SFADDEDKYG RKAVFGSSIV STFRFPTLHT
LICYGSCEGL ICIYCVYSPN IVVNPATKWH RSCPLSNLQQ FLDDKFEKKE YDFPTPKLAF
GKDKLNGTYK QVWLYNSSEF RLDDVTTCEV FDFSNNAWRY VHPASPYRIN DYQDPVYSDG
SVHWLTEGKE SKILSFHLHT ETFQVLCEAP FLRERDPVGD SMCILDNRLC VSEINGPAQL
IWSLDSSGGN KC
