FB50_ARATH
ID FB50_ARATH Reviewed; 385 AA.
AC Q9FX89; F4I3B4;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 24-MAR-2009, sequence version 2.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=Putative F-box protein At1g49610;
GN OrderedLocusNames=At1g49610; ORFNames=F14J22.15;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q9FX89-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q9FX89-2; Sequence=VSP_042248;
CC -!- SEQUENCE CAUTION:
CC Sequence=AAG13047.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AAG13047.1; Type=Frameshift; Evidence={ECO:0000305};
CC Sequence=AEE32449.1; Type=Frameshift; Evidence={ECO:0000305};
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC011807; AAG13047.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE32449.1; ALT_FRAME; Genomic_DNA.
DR PIR; G96532; G96532.
DR RefSeq; NP_175384.1; NM_103849.1.
DR AlphaFoldDB; Q9FX89; -.
DR PRIDE; Q9FX89; -.
DR GeneID; 841385; -.
DR KEGG; ath:AT1G49610; -.
DR Araport; AT1G49610; -.
DR InParanoid; Q9FX89; -.
DR OrthoDB; 793734at2759; -.
DR PRO; PR:Q9FX89; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9FX89; baseline and differential.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR044997; F-box_plant.
DR InterPro; IPR032675; LRR_dom_sf.
DR PANTHER; PTHR32153; PTHR32153; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
PE 4: Predicted;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..385
FT /note="Putative F-box protein At1g49610"
FT /id="PRO_0000283324"
FT DOMAIN 25..73
FT /note="F-box"
FT VAR_SEQ 330..385
FT /note="PGILRVLQNSPELKKLTLHTMDREARTMSFHFEFVESEILTICFYINEILFC
FT SSTG -> PVQGEYDPTYLRCMKLDHCSIFAKISRRNVESKHVASFMELMIKTTKKLEK
FT MVVRLESYLDGRGFEELLEMVPMLSQNNNVSIVLSSTKPRQSL (in isoform 2)"
FT /evidence="ECO:0000305"
FT /id="VSP_042248"
SQ SEQUENCE 385 AA; 43707 MW; 1637328D3ABBFACE CRC64;
MALDGENRDG GSASVRVLKH CLEDVDSISS LPDVILQENL SLIPTKFAIR TSVLSKRWRH
VWSETPSLDF DDCYKLDVDF IDKTLALYRA RKIMTFDLWI TNGINLPYID GWIKFAMSRN
VENLFLSFDF RLYDVPDYLY INSSVKQLVL GTESSELNPR CSVSWSSLTK LSLFSDESIA
KILSGCPIIE SLTLHFCDQL MVLDLTKSPS LKILEIHGSI WGSGPKHIVA PHIHSLTLKT
SQFFIYFCDI SSLTEAKVDI CFCSLKEIKA NFLLDTVLKC LYKLQNVDKL TFGANFLKIL
SLAEGRGLPF PMFKAKALTL ETTISKYVIP GILRVLQNSP ELKKLTLHTM DREARTMSFH
FEFVESEILT ICFYINEILF CSSTG