FB69_ARATH
ID FB69_ARATH Reviewed; 403 AA.
AC Q1PFI4; O80761;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 24-MAR-2009, sequence version 2.
DT 25-MAY-2022, entry version 80.
DE RecName: Full=F-box protein At1g60400;
GN OrderedLocusNames=At1g60400; ORFNames=T13D8.27;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q1PFI4-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q1PFI4-2; Sequence=VSP_036625;
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC004473; AAC24067.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE33682.1; -; Genomic_DNA.
DR EMBL; DQ446379; ABE65727.1; -; mRNA.
DR PIR; T02290; T02290.
DR RefSeq; NP_176243.1; NM_104727.1. [Q1PFI4-1]
DR AlphaFoldDB; Q1PFI4; -.
DR STRING; 3702.AT1G60400.1; -.
DR PaxDb; Q1PFI4; -.
DR PRIDE; Q1PFI4; -.
DR ProteomicsDB; 222565; -. [Q1PFI4-1]
DR EnsemblPlants; AT1G60400.1; AT1G60400.1; AT1G60400. [Q1PFI4-1]
DR GeneID; 842335; -.
DR Gramene; AT1G60400.1; AT1G60400.1; AT1G60400. [Q1PFI4-1]
DR KEGG; ath:AT1G60400; -.
DR Araport; AT1G60400; -.
DR TAIR; locus:2195603; AT1G60400.
DR HOGENOM; CLU_010721_1_3_1; -.
DR InParanoid; Q1PFI4; -.
DR OMA; CPRLEYM; -.
DR OrthoDB; 686125at2759; -.
DR PhylomeDB; Q1PFI4; -.
DR PRO; PR:Q1PFI4; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q1PFI4; baseline and differential.
DR Genevisible; Q1PFI4; AT.
DR Gene3D; 3.80.10.10; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR013101; Leu-rich_rpt_2.
DR InterPro; IPR032675; LRR_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF07723; LRR_2; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..403
FT /note="F-box protein At1g60400"
FT /id="PRO_0000283343"
FT DOMAIN 13..59
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT VAR_SEQ 73..361
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:17147637"
FT /id="VSP_036625"
SQ SEQUENCE 403 AA; 45864 MW; 1AABD75E6B48F4D0 CRC64;
MVRTSIKSIG SGIDRLSALP EHLLCRILSE LSTKDSVRTS VLSKHWRNLW LHVPVLELET
SDFPDNLVFR EFIDRFVGFD KEIDLKSFDI FYDVNVLWYD DFLWMIDDVV KRRVCDLMVT
NNPYVVNEKL VKMPISLYSC ATLVNLNLSF VAMNNLPSES VCLPRVKTLY LHGVKLDGDS
ILGTLVSSCS VLEDLTVVTH PGDYEKVVCF RSQSVKSFTI ESQCEYKDPN VEIDCPRLEY
MCIREYQSES FVVHSIGPYA KVDVDIFFEV EYEDPLAISM IRNFLTGISK VREMTISSRT
LEVIRGYHSM VKALPQFSNL SSLDALLVES YWELLPVFLG CCINLNSLVV ELDGLSEIEE
FKVSPLLQDS LSARGFVQQK TPVSVTKTSS ERKIAAYFVK KSG