FB6_ARATH
ID FB6_ARATH Reviewed; 375 AA.
AC Q9FWW8; Q8L3T3; Q8L3U2; Q8LGQ1; Q8LGQ2;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Putative F-box protein At1g12190;
GN OrderedLocusNames=At1g12190; ORFNames=T28K15.8;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 210-375, AND VARIANTS LEU-266;
RP ASP-287; ILE-326; THR-361; LYS-366 AND 371-GLU-THR-372.
RC STRAIN=cv. Ab-27, cv. Ang-0, cv. Bla-2, cv. Bur-0, cv. Columbia, cv. Ct-1,
RC cv. Cvi-0, cv. Fm-15, cv. Hs-12, cv. Kas-1, cv. KZ-13,
RC cv. Landsberg erecta, cv. Lip-0, cv. Mt-0, cv. NFC-5, cv. Pog-0, cv. Rf-4,
RC cv. Tamm-07, cv. Tsu-0, cv. Up-14, cv. Wu-0, and cv. Zu-0;
RX PubMed=12172007; DOI=10.1073/pnas.172203599;
RA Tian D., Araki H., Stahl E., Bergelson J., Kreitman M.;
RT "Signature of balancing selection in Arabidopsis.";
RL Proc. Natl. Acad. Sci. U.S.A. 99:11525-11530(2002).
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DR EMBL; AC022522; AAG12575.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE28847.1; -; Genomic_DNA.
DR EMBL; AY062364; AAL65585.1; -; Genomic_DNA.
DR EMBL; AY062365; AAL65586.1; -; Genomic_DNA.
DR EMBL; AY062366; AAL65587.1; -; Genomic_DNA.
DR EMBL; AY062367; AAL65588.1; -; Genomic_DNA.
DR EMBL; AY062368; AAL65589.1; -; Genomic_DNA.
DR EMBL; AY062369; AAL65590.1; -; Genomic_DNA.
DR EMBL; AY062370; AAL65591.1; -; Genomic_DNA.
DR EMBL; AY062371; AAL65592.1; -; Genomic_DNA.
DR EMBL; AY062372; AAL65593.1; -; Genomic_DNA.
DR EMBL; AY062373; AAL65594.1; -; Genomic_DNA.
DR EMBL; AY062374; AAL65595.1; -; Genomic_DNA.
DR EMBL; AY062375; AAL65596.1; -; Genomic_DNA.
DR EMBL; AY062376; AAL65597.1; -; Genomic_DNA.
DR EMBL; AY062377; AAL65598.1; -; Genomic_DNA.
DR EMBL; AY062378; AAL65599.1; -; Genomic_DNA.
DR EMBL; AY062379; AAL65600.1; -; Genomic_DNA.
DR EMBL; AY062380; AAL65601.1; -; Genomic_DNA.
DR EMBL; AY062381; AAL65602.1; -; Genomic_DNA.
DR PIR; H86256; H86256.
DR RefSeq; NP_172683.1; NM_101091.1.
DR AlphaFoldDB; Q9FWW8; -.
DR PaxDb; Q9FWW8; -.
DR PRIDE; Q9FWW8; -.
DR EnsemblPlants; AT1G12190.1; AT1G12190.1; AT1G12190.
DR GeneID; 837772; -.
DR Gramene; AT1G12190.1; AT1G12190.1; AT1G12190.
DR KEGG; ath:AT1G12190; -.
DR Araport; AT1G12190; -.
DR TAIR; locus:2202002; AT1G12190.
DR HOGENOM; CLU_034692_2_1_1; -.
DR InParanoid; Q9FWW8; -.
DR OMA; VSKEWNT; -.
DR OrthoDB; 693370at2759; -.
DR PhylomeDB; Q9FWW8; -.
DR PRO; PR:Q9FWW8; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9FWW8; baseline and differential.
DR Genevisible; Q9FWW8; AT.
DR InterPro; IPR006527; F-box-assoc_dom_typ1.
DR InterPro; IPR017451; F-box-assoc_interact_dom.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF07734; FBA_1; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR TIGRFAMs; TIGR01640; F_box_assoc_1; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 4: Predicted;
KW Reference proteome.
FT CHAIN 1..375
FT /note="Putative F-box protein At1g12190"
FT /id="PRO_0000283285"
FT DOMAIN 1..46
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT VARIANT 266
FT /note="F -> L (in strain: cv. Zu-0)"
FT /evidence="ECO:0000269|PubMed:12172007"
FT VARIANT 287
FT /note="A -> D (in strain: cv. Bur-0 and cv. Wu-0)"
FT /evidence="ECO:0000269|PubMed:12172007"
FT VARIANT 326
FT /note="N -> I (in strain: cv. Bur-0 and cv. Wu-0)"
FT /evidence="ECO:0000269|PubMed:12172007"
FT VARIANT 361
FT /note="I -> T (in strain: cv. Bur-0 and cv. Wu-0)"
FT /evidence="ECO:0000269|PubMed:12172007"
FT VARIANT 366
FT /note="E -> K (in strain: cv. Mt-0)"
FT /evidence="ECO:0000269|PubMed:12172007"
FT VARIANT 371..372
FT /note="KI -> ET (in strain: cv. Bur-0 and cv. Wu-0)"
SQ SEQUENCE 375 AA; 43357 MW; 779698513E07AFDF CRC64;
MACVKFPWEL MEEILYRVPS LSLSRFKTVS KEWNTLLNDK TFIKKHLALV RPQFRLWTNS
KVYSVDVSLN DDPNIELREL PLDIPYVIDH RTTNFLPCND LLFCASWWSN KAVVWNPSLR
QTRLIKSGEE HFRFGGIGYD SGRPGKGYHI FGHSHSRLSV NGNTSKFIKR FYITKFESNA
WKCIDDVSLG ENSIGGDSLD NNNVSLNGNL YWTTNSYDTD EYLIQSFDFS KEIFKIFCVL
PRKKDSSDIP VLSVFRGDRL SVLHKFKGTN NMEIWVTKNK INESVKAVVW MMFMTVSIPI
YKDSKPSYFI NDIYEKRLVM CCSDENGKAC VYIVKDQARK KIQLGFHVSE FSHCFYDPSL
IPIPSETSGQ KISNS
