FB74_ARATH
ID FB74_ARATH Reviewed; 370 AA.
AC Q1PFG1; F4IEV3; Q9C709;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 24-MAR-2009, sequence version 2.
DT 25-MAY-2022, entry version 82.
DE RecName: Full=F-box protein At1g66490;
GN OrderedLocusNames=At1g66490; ORFNames=F28G11.7;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q1PFG1-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q1PFG1-2; Sequence=VSP_036626, VSP_036627;
CC -!- MISCELLANEOUS: [Isoform 2]: May be due to intron retention.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAG51152.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AEE34515.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC074025; AAG51152.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE34515.1; ALT_SEQ; Genomic_DNA.
DR EMBL; DQ446402; ABE65746.1; -; mRNA.
DR PIR; E96690; E96690.
DR RefSeq; NP_176822.1; NM_105320.1.
DR AlphaFoldDB; Q1PFG1; -.
DR PaxDb; Q1PFG1; -.
DR PRIDE; Q1PFG1; -.
DR GeneID; 842967; -.
DR KEGG; ath:AT1G66490; -.
DR Araport; AT1G66490; -.
DR HOGENOM; CLU_034692_0_0_1; -.
DR InParanoid; Q1PFG1; -.
DR OrthoDB; 634455at2759; -.
DR PhylomeDB; Q1PFG1; -.
DR PRO; PR:Q1PFG1; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q1PFG1; baseline and differential.
DR Genevisible; Q1PFG1; AT.
DR InterPro; IPR006527; F-box-assoc_dom_typ1.
DR InterPro; IPR017451; F-box-assoc_interact_dom.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF07734; FBA_1; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR TIGRFAMs; TIGR01640; F_box_assoc_1; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..370
FT /note="F-box protein At1g66490"
FT /id="PRO_0000283347"
FT DOMAIN 1..46
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT VAR_SEQ 159..160
FT /note="YF -> CF (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:17147637"
FT /id="VSP_036626"
FT VAR_SEQ 161..370
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:17147637"
FT /id="VSP_036627"
SQ SEQUENCE 370 AA; 43092 MW; DD07A70BC0EC6F79 CRC64;
MRTISDLPVA LVEEILSRVP LTSLSAVRST CKTWNALSKT QIFGKTRQQF LGFMMIDFGL
YSIKFDLQGL NYESDFVEPS IKRVSILDQL DIFKVFHCEG LLLCVFRGNR WPVVWNPYLG
GTGWIQPISD FHKYQVSDKF AFGYENKNRN YKILRFLRYF FGFYDIYDLN SSAWKVLDVN
PDCDIKCGVS LKGKTYFFAK EIAKAPNVKD FLVCFDFTAE RFGPRLPLPF HSCGLFSEHV
TLSCVRDEHL AVLYRRYNGV MEIYITTKIE PNEVFWSNFL KVDLTTFPDR FYGSRSHYFF
IDEEKKVAVV FKNEPEWTMD CSYQTAYIIG KGGYLKSVKF GETPNDRKHN NAWNINSFML
SSYVPSLVQL