FB84_ARATH
ID FB84_ARATH Reviewed; 351 AA.
AC Q94C27; Q9S730;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 124.
DE RecName: Full=F-box protein At1g70590;
GN OrderedLocusNames=At1g70590; ORFNames=F24J13.16, F5A18.23;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- SEQUENCE CAUTION:
CC Sequence=AAG52341.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=AAG52462.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC010796; AAG52462.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AC011663; AAG52341.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE35086.1; -; Genomic_DNA.
DR EMBL; AY037204; AAK59789.1; -; mRNA.
DR EMBL; BT002677; AAO11593.1; -; mRNA.
DR PIR; A96730; A96730.
DR RefSeq; NP_564992.1; NM_105727.4.
DR AlphaFoldDB; Q94C27; -.
DR SMR; Q94C27; -.
DR BioGRID; 28616; 13.
DR IntAct; Q94C27; 1.
DR STRING; 3702.AT1G70590.1; -.
DR iPTMnet; Q94C27; -.
DR PaxDb; Q94C27; -.
DR PRIDE; Q94C27; -.
DR EnsemblPlants; AT1G70590.1; AT1G70590.1; AT1G70590.
DR GeneID; 843396; -.
DR Gramene; AT1G70590.1; AT1G70590.1; AT1G70590.
DR KEGG; ath:AT1G70590; -.
DR Araport; AT1G70590; -.
DR TAIR; locus:2026774; AT1G70590.
DR eggNOG; KOG1550; Eukaryota.
DR HOGENOM; CLU_073713_0_0_1; -.
DR InParanoid; Q94C27; -.
DR OMA; GISYLQV; -.
DR OrthoDB; 1039341at2759; -.
DR PhylomeDB; Q94C27; -.
DR PRO; PR:Q94C27; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q94C27; baseline and differential.
DR Genevisible; Q94C27; AT.
DR Gene3D; 1.25.40.10; -; 2.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR006597; Sel1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF08238; Sel1; 5.
DR SMART; SM00671; SEL1; 5.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50293; TPR_REGION; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; TPR repeat.
FT CHAIN 1..351
FT /note="F-box protein At1g70590"
FT /id="PRO_0000283357"
FT DOMAIN 62..111
FT /note="F-box"
FT REPEAT 105..141
FT /note="Sel1-like"
FT REPEAT 142..175
FT /note="TPR"
FT REGION 1..60
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 20..34
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 35..60
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 351 AA; 39134 MW; A3266461779B18EE CRC64;
MKQRTWPCRS EGSRFSSLSF LKPHDKDKRS RISSINKATA KSTTSSRSSS SSSSSRPPSN
EFGDFSMLPY DILMKIAAPF SHPNLQAASL VCKSWRDALK PLRESMLLIR WGKKYKHGRG
GVRANLDKAL DSFLKGAMRG STLAMVDAGL VYWERGEKEK AVNLYRRASE LGDAVGQCNL
GIAYLQVQPS NPKEAMKWLK QSAENGYVRA QYQLALCLHH GRVVQTNLLE ATKWYLKAAE
GGYVRAMYNI SLCYSVGEGL PQNRKLARKW MKRAADHGHS KAQFEHGLAL FSEGEMLKSV
LYLELAERGG EAAATPVKEV VHQQLSATFG GQAVHHAIHQ ANNWRPLPVT R
