FB8_ARATH
ID FB8_ARATH Reviewed; 278 AA.
AC Q9M9T0; Q1G3F3;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Probable F-box protein At1g14315;
GN OrderedLocusNames=At1g14315; ORFNames=F14L17.8;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] (ISOFORM 2).
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC STRAIN=cv. Columbia;
RX PubMed=17229318; DOI=10.1186/1471-2164-8-18;
RA Moskal W.A. Jr., Wu H.C., Underwood B.A., Wang W., Town C.D., Xiao Y.-L.;
RT "Experimental validation of novel genes predicted in the un-annotated
RT regions of the Arabidopsis genome.";
RL BMC Genomics 8:18-18(2007).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q9M9T0-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q9M9T0-2; Sequence=VSP_034098, VSP_034099;
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DR EMBL; AC012188; AAF43931.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE29143.1; -; Genomic_DNA.
DR EMBL; DQ487631; ABF59409.1; -; Genomic_DNA.
DR EMBL; EF183410; -; NOT_ANNOTATED_CDS; mRNA.
DR PIR; D86277; D86277.
DR RefSeq; NP_001117286.1; NM_001123814.1. [Q9M9T0-2]
DR AlphaFoldDB; Q9M9T0; -.
DR SMR; Q9M9T0; -.
DR PRIDE; Q9M9T0; -.
DR EnsemblPlants; AT1G14315.1; AT1G14315.1; AT1G14315. [Q9M9T0-2]
DR GeneID; 6241224; -.
DR Gramene; AT1G14315.1; AT1G14315.1; AT1G14315. [Q9M9T0-2]
DR KEGG; ath:AT1G14315; -.
DR Araport; AT1G14315; -.
DR InParanoid; Q9M9T0; -.
DR PhylomeDB; Q9M9T0; -.
DR PRO; PR:Q9M9T0; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9M9T0; baseline.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR Gene3D; 2.120.10.80; -; 1.
DR InterPro; IPR006527; F-box-assoc_dom_typ1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR011043; Gal_Oxase/kelch_b-propeller.
DR InterPro; IPR015915; Kelch-typ_b-propeller.
DR Pfam; PF00646; F-box; 1.
DR Pfam; PF07734; FBA_1; 1.
DR SMART; SM00256; FBOX; 1.
DR SUPFAM; SSF50965; SSF50965; 1.
DR SUPFAM; SSF81383; SSF81383; 1.
DR PROSITE; PS50181; FBOX; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..278
FT /note="Probable F-box protein At1g14315"
FT /id="PRO_0000283287"
FT DOMAIN 1..43
FT /note="F-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00080"
FT VAR_SEQ 1..86
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:17229318"
FT /id="VSP_034098"
FT VAR_SEQ 87..106
FT /note="TLNNIVYNPATRWHRRFPVS -> MYNSSELGLENATTCEVFDF (in
FT isoform 2)"
FT /evidence="ECO:0000303|PubMed:17229318"
FT /id="VSP_034099"
SQ SEQUENCE 278 AA; 32085 MW; F95754DA267D26F7 CRC64;
MQLLPHDTVE DILERVPVKS LLRFKSACKQ WKLTIESQYF QAKQLICSAG GKDLNLVLVS
EVPKRYHIYQ LFHNSCDGLV CLFDYQTLNN IVYNPATRWH RRFPVSSTNT WRYINPSSPY
RINTSSSRGH ALYVDGSLYW LTGKKEIKVL ALDLHTETFQ VISKAPFAEA DHRNIITRSL
NNRLCLSVSK PLQQMIIWSF NSENKTWEQI YSIVNRSVTQ SLPVAILEKN KLLCCPRSNS
RQLMIYDIKT KSVDSVSIGT YRCGDSVFCY FESLISIL
