FBCD1_XENTR
ID FBCD1_XENTR Reviewed; 457 AA.
AC Q0P4P2;
DT 10-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT 19-SEP-2006, sequence version 1.
DT 03-AUG-2022, entry version 66.
DE RecName: Full=Fibrinogen C domain-containing protein 1;
GN Name=fibcd1;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Acetyl group-binding receptor which shows a calcium-dependent
CC binding to acetylated structures such as chitin, some N-acetylated
CC carbohydrates, and amino acids. {ECO:0000250}.
CC -!- SUBUNIT: Homotetramer; disulfide-linked. {ECO:0000305}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass type II
CC membrane protein {ECO:0000305}.
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DR EMBL; BC121964; AAI21965.1; -; mRNA.
DR RefSeq; NP_001072519.1; NM_001079051.1.
DR AlphaFoldDB; Q0P4P2; -.
DR SMR; Q0P4P2; -.
DR STRING; 8364.ENSXETP00000011091; -.
DR PaxDb; Q0P4P2; -.
DR DNASU; 779974; -.
DR GeneID; 779974; -.
DR KEGG; xtr:779974; -.
DR CTD; 84929; -.
DR Xenbase; XB-GENE-483361; fibcd1.
DR eggNOG; KOG2579; Eukaryota.
DR InParanoid; Q0P4P2; -.
DR OrthoDB; 523014at2759; -.
DR Proteomes; UP000008143; Chromosome 8.
DR Proteomes; UP000790000; Unplaced.
DR Bgee; ENSXETG00000001469; Expressed in brain and 1 other tissue.
DR GO; GO:0062023; C:collagen-containing extracellular matrix; IBA:GO_Central.
DR GO; GO:0005615; C:extracellular space; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0008061; F:chitin binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0005102; F:signaling receptor binding; IBA:GO_Central.
DR GO; GO:0007155; P:cell adhesion; IBA:GO_Central.
DR CDD; cd00087; FReD; 1.
DR Gene3D; 3.90.215.10; -; 1.
DR InterPro; IPR036056; Fibrinogen-like_C.
DR InterPro; IPR014716; Fibrinogen_a/b/g_C_1.
DR InterPro; IPR002181; Fibrinogen_a/b/g_C_dom.
DR InterPro; IPR020837; Fibrinogen_CS.
DR Pfam; PF00147; Fibrinogen_C; 1.
DR SMART; SM00186; FBG; 1.
DR SUPFAM; SSF56496; SSF56496; 1.
DR PROSITE; PS00514; FIBRINOGEN_C_1; 1.
DR PROSITE; PS51406; FIBRINOGEN_C_2; 1.
PE 2: Evidence at transcript level;
KW Calcium; Chitin-binding; Disulfide bond; Glycoprotein; Membrane;
KW Metal-binding; Reference proteome; Signal-anchor; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..457
FT /note="Fibrinogen C domain-containing protein 1"
FT /id="PRO_0000294320"
FT TOPO_DOM 1..33
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 34..54
FT /note="Helical; Signal-anchor for type II membrane protein"
FT /evidence="ECO:0000255"
FT TOPO_DOM 55..457
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT DOMAIN 231..454
FT /note="Fibrinogen C-terminal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00739"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 211..235
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 389
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT BINDING 391
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT SITE 401
FT /note="Implicated in ligand binding"
FT /evidence="ECO:0000250"
FT SITE 411
FT /note="Implicated in ligand binding"
FT /evidence="ECO:0000250"
FT SITE 427
FT /note="Implicated in ligand binding"
FT /evidence="ECO:0000250"
FT SITE 428
FT /note="Implicated in ligand binding"
FT /evidence="ECO:0000250"
FT CARBOHYD 233
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 336
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 240..269
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00739"
FT DISULFID 397..410
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00739"
SQ SEQUENCE 457 AA; 50966 MW; 16F2E2C0BB45651C CRC64;
MGSDRWKNIG GAPQMEDSVQ DKSQRKGCGY ILCTVLLSVA VLLAVTVTGA VLFMNHYHAP
STEPPPVITT NMEDPNALVT IERADSSHIN IFIDPNCPDP FPRLEGLQSA LLSALADHDS
EQKVAGGKER ALLTSLSDQV AQMVSQVARQ RADWENVKKV QNGLGAEIGA LKNEQGRLIK
LLSEGQSHVA QLGSSVSEVL ETVQRELGSG RPRVKADLQR APSRSSRPRG CANGSKPRDC
YDIYMSGQQE DGVYSVFPIH YPSGFQVFCD MTTDGGGWTV FQRREDGSVN FFQGWEQYRD
GFGKLTGEHW LGLQRIHLLT MQTHYQLRID LEDFENATAY ALYNTFGVGL FSVNPEEDGY
PITISDYTGT AGDSLGKHSG MKFTTKDMDN DHSENNCASF YHGAWWYRNC HTSNLNGQYL
RGHHASYADG IEWSSWTGWQ YSLKFTEMKI RPQREEN