FBCDB_XENLA
ID FBCDB_XENLA Reviewed; 457 AA.
AC Q5XK91;
DT 10-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 60.
DE RecName: Full=Fibrinogen C domain-containing protein 1-B;
GN Name=fibcd1-b;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Acetyl group-binding receptor which shows a calcium-dependent
CC binding to acetylated structures such as chitin, some N-acetylated
CC carbohydrates, and amino acids. {ECO:0000250}.
CC -!- SUBUNIT: Homotetramer; disulfide-linked. {ECO:0000305}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass type II
CC membrane protein {ECO:0000305}.
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DR EMBL; BC083021; AAH83021.1; -; mRNA.
DR RefSeq; NP_001088141.1; NM_001094672.1.
DR RefSeq; XP_018087538.1; XM_018232049.1.
DR RefSeq; XP_018087539.1; XM_018232050.1.
DR RefSeq; XP_018087540.1; XM_018232051.1.
DR RefSeq; XP_018087541.1; XM_018232052.1.
DR RefSeq; XP_018087542.1; XM_018232053.1.
DR AlphaFoldDB; Q5XK91; -.
DR SMR; Q5XK91; -.
DR GeneID; 494847; -.
DR KEGG; xla:494847; -.
DR CTD; 494847; -.
DR Xenbase; XB-GENE-6255067; fibcd1.S.
DR OMA; PQRMSCG; -.
DR OrthoDB; 523014at2759; -.
DR Proteomes; UP000186698; Chromosome 8S.
DR Bgee; 494847; Expressed in camera-type eye and 13 other tissues.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0008061; F:chitin binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd00087; FReD; 1.
DR Gene3D; 3.90.215.10; -; 1.
DR InterPro; IPR036056; Fibrinogen-like_C.
DR InterPro; IPR014716; Fibrinogen_a/b/g_C_1.
DR InterPro; IPR002181; Fibrinogen_a/b/g_C_dom.
DR InterPro; IPR020837; Fibrinogen_CS.
DR Pfam; PF00147; Fibrinogen_C; 1.
DR SMART; SM00186; FBG; 1.
DR SUPFAM; SSF56496; SSF56496; 1.
DR PROSITE; PS00514; FIBRINOGEN_C_1; 1.
DR PROSITE; PS51406; FIBRINOGEN_C_2; 1.
PE 2: Evidence at transcript level;
KW Calcium; Chitin-binding; Disulfide bond; Glycoprotein; Membrane;
KW Metal-binding; Reference proteome; Signal-anchor; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..457
FT /note="Fibrinogen C domain-containing protein 1-B"
FT /id="PRO_0000294319"
FT TOPO_DOM 1..33
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 34..54
FT /note="Helical; Signal-anchor for type II membrane protein"
FT /evidence="ECO:0000255"
FT TOPO_DOM 55..457
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT DOMAIN 231..454
FT /note="Fibrinogen C-terminal"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00739"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 389
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT BINDING 391
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000250"
FT SITE 401
FT /note="Implicated in ligand binding"
FT /evidence="ECO:0000250"
FT SITE 411
FT /note="Implicated in ligand binding"
FT /evidence="ECO:0000250"
FT SITE 427
FT /note="Implicated in ligand binding"
FT /evidence="ECO:0000250"
FT SITE 428
FT /note="Implicated in ligand binding"
FT /evidence="ECO:0000250"
FT CARBOHYD 233
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 336
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 240..269
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00739"
FT DISULFID 397..410
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00739"
SQ SEQUENCE 457 AA; 51037 MW; 926D5DB33703BBE1 CRC64;
MGSDRWKNIR GTPQMEDSVQ EKSQRKGCGY ILCTVLLSVA VLLAVTVTGA VLFMNQYHAP
STEPPPVITT NMEDPNALVT IERADSSHIN IFIDPNCPDT FPRLEGLQST MLSALADHDS
EQKMAGGKER ALLTSLSDQV AQMVSQVARQ RADWENVKKV QNGLGTEIGA LKNEQGRLIK
LLSEGQSHVA QLGSSVSEVL ETVQRELGSG RPRLKADLQR APSRSARPRG CANGSKPRDC
YDIYMSGQQE DGVYSVFPIH YPSGFQVFCD MTTDGGGWTV FQRREDGSVN FFQGWEQYRD
GFGKLTGEHW LGLQGIHLLT MQAHYQLRID LEDFDNATAY AVYNTFGVGL FSVNPEEDGY
PITVSDYTGT AGDSLGKHSG MKFTTKDLDN DHSENNCATF YHGAWWYRNC HTSNLNGQYL
RGHHASYADG IEWSSWTGWQ YSLKFTEMKI RPQREEN